ggKbase home page

Ig5770_scaffold_3085

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_3085_1
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..440
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CYB8_9BACT
hypothetical protein
Tax=GWD2_Desulfuromonadales_61_12_curated
Ig5770_scaffold_3085_2
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

862..2112
DNA (1251bp) protein (417aa)
phosphatidylinositol kinase n=1 Tax=Novispirillum itersonii RepID=UPI000363E331
HipA domain-containing protein rbh
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Ig5770_scaffold_3085_3
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2112..2672
DNA (561bp) protein (187aa)
Glycosyl transferase possibly involved in lipopolysaccharide synthesis n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLF0_AZOSU
glycosyl transferase family protein
Glycosyl transferase possibly involved in lipopolysaccharide synthesis {ECO:0000313|EMBL:AEV24479.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Ig5770_scaffold_3085_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2682..3377
DNA (696bp) protein (232aa)
Polysaccharide biosynthesis protein id=1262484 bin=GWE1_Burkholderiales_65_30 species=Herbaspirillum seropedicae genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
capD; predicted nucleoside-diphosphate sugar epimerase
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ig5770_scaffold_3085_5
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3334..3975
DNA (642bp) protein (214aa)
membrane protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002E47234
Polysaccharide biosynthesis protein CapD type
Polysaccharide biosynthesis protein CapD type {ECO:0000313|EMBL:ACO75764.1}; TaxID=557598 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkongensis (strain HLHK9).;"
Ig5770_scaffold_3085_6
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3960..4349
DNA (390bp) protein (130aa)
membrane protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002E47234
Polysaccharide biosynthesis protein CapD type
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
Ig5770_scaffold_3085_7
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4352..5311)
DNA (960bp) protein (320aa)
Lipopolysaccharide heptosyltransferase I n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RQX9_ACCPU
lipopolysaccharide heptosyltransferase I
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_3085_8
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5355..6605)
DNA (1251bp) protein (417aa)
Putative O-antigen polymerase n=1 Tax=mine drainage metagenome RepID=E6PN58_9ZZZZ
lipid A core-O-antigen ligase-like enzyme
Tax=BJP_08E140C01_Dechloromonas_61_78
Ig5770_scaffold_3085_9
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6605..7741)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=beta proteobacterium L13 RepID=UPI000374EB12
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:KJH69073.1}; TaxID=536 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium violaceum.;"
rfbU; lipopolysaccharide biosynthesis protein
Ig5770_scaffold_3085_10
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7755..8681)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E4I7_GEOLS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACD94502.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
Ig5770_scaffold_3085_11
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8735..9784
DNA (1050bp) protein (350aa)
Lipopolysaccharide heptosyltransferase III n=1 Tax=Ralstonia sp. PBA RepID=I9KT59_9RALS rbh
glycosyltransferase 9 family protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
Ig5770_scaffold_3085_12
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9805..11619)
DNA (1815bp) protein (605aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B8G7_9PROT
lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
Ig5770_scaffold_3085_13
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11609..12436)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QGK7_AZOSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV25086.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Displaying 13 items

View Taxonomy