ggKbase home page

Ig5770_scaffold_3389

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_3389_1
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..116)
DNA (114bp) protein (38aa)
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_3389_2
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

709..1644
DNA (936bp) protein (312aa)
LysM repeat-containing protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QQ29_AZOSU
LysM repeat-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
Ig5770_scaffold_3389_3
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1629..3533)
DNA (1905bp) protein (635aa)
ABC transporter ATP-binding protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00036DDA27
ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
Ig5770_scaffold_3389_4
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3530..4861)
DNA (1332bp) protein (444aa)
Oligopeptide transport system permease protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PTI9_9RHOO rbh
oppC; oligopeptide transport system permease protein rbh
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_3389_5
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4858..5835)
DNA (978bp) protein (326aa)
peptide ABC transporter permease n=1 Tax=Azoarcus toluclasticus RepID=UPI00036247E6
oppB; oligopeptide transport system permease protein oppB rbh
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
Ig5770_scaffold_3389_6
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5903..6331
DNA (429bp) protein (143aa)
rhodanese-related sulfurtransferase
Rhodanese-related sulfurtransferase id=12498207 bin=THIO_MID species=Lamprocystis purpurea genus=Lamprocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=BJP_IG2102_Gammaproteobacteria_62_140
Ig5770_scaffold_3389_7
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6320..6610)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3ABF3_9PROT
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO28269.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Ig5770_scaffold_3389_8
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6607..7113)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI000378E73D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO30602.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Ig5770_scaffold_3389_9
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7120..8190
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI0003770BC3
ankyrin repeat-containing protein
Ankyrin repeat-containing protein {ECO:0000313|EMBL:BAO30601.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Ig5770_scaffold_3389_10
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8262..8696
DNA (435bp) protein (145aa)
Hemerythrin {ECO:0000313|EMBL:AKH20937.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
Metal-binding protein id=4379192 bin=GWF2_OP9_related_35_9 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
hemerythrin sipunculid
Ig5770_scaffold_3389_11
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8669..9829)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I600_DESAP
hypothetical protein
Tax=CG_Rhodocyc_01
Ig5770_scaffold_3389_12
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9778..11955)
DNA (2178bp) protein (726aa)
DNA polymerase III subunit epsilon n=1 Tax=Thauera sp. 63 RepID=N6YE54_9RHOO rbh
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:ENO80388.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
dnaQ; DNA polymerase III, epsilon subunit rbh
Ig5770_scaffold_3389_trna_1
unknown

Not on your lists

comp(12002..12074)
DNA (73bp)
transferRNA Thr
Ig5770_scaffold_3389_13
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12152..13672
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI0003773600
sensory transduction histidine kinase
Tax=GWA2_Rhodocyclales_65_20_curated
Ig5770_scaffold_3389_14
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13674..14315
DNA (642bp) protein (214aa)
LuxR family transcriptional regulator n=1 Tax=Rhodocyclaceae RepID=UPI00037F05A0
response regulator receiver, LuxR family
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
Ig5770_scaffold_3389_15
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14834..16018
DNA (1185bp) protein (395aa)
Diguanylate cyclase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJK2_ACCPU
GGDEF
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
Displaying 16 items

View Taxonomy