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js4906-20-3_S2_scaffold_2

Search features with annotation key words

Displaying items 1-30 of 458 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-20-3_S2_scaffold_2_1
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

3..263
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Clostridium sp. CAG:768 RepID=R7HUZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE42763.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
js4906-20-3_S2_scaffold_2_2
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

401..1048
DNA (648bp) protein (216aa)
Uncharacterized protein Tax=Clostridium sp. CAG:715 RepID=R5DUZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX79811.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-20-3_S2_scaffold_2_3
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(1084..1614)
DNA (531bp) protein (177aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5HH30_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24117.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-20-3_S2_scaffold_2_4
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(1627..3372)
DNA (1746bp) protein (582aa)
Peptidase family M49 Tax=Brachyspira sp. CAG:484 RepID=R5H389_9SPIR
Peptidase family M49 {ECO:0000313|EMBL:CCY24165.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-20-3_S2_scaffold_2_5
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

3526..3753
DNA (228bp) protein (76aa)
Glutaredoxin Tax=Acinetobacter sp. CAG:196 RepID=R5SDG2_9GAMM
Glutaredoxin {ECO:0000313|EMBL:CCZ51083.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
js4906-20-3_S2_scaffold_2_6
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

3850..4788
DNA (939bp) protein (313aa)
seg 534..552 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CDE89452.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
js4906-20-3_S2_scaffold_2_7
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

4929..5753
DNA (825bp) protein (275aa)
RNA polymerase sigma-28 subunit FliA/WhiG (EC:4.1.1.65); K02405 RNA polymerase sigma factor for flagellar operon FliA bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
RNA polymerase sigma-D factor
js4906-20-3_S2_scaffold_2_8
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5755..6423)
DNA (669bp) protein (223aa)
HAD-superfamily hydrolase subfamily IA variant 3 Tax=Clostridium sp. CAG:306 RepID=R6PJ45_9CLOT
HAD-superfamily hydrolase subfamily IA variant 3 {ECO:0000313|EMBL:CDC20874.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
HAD-superfamily hydrolase
js4906-20-3_S2_scaffold_2_9
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(6519..7103)
DNA (585bp) protein (195aa)
Uncharacterized protein Tax=Clostridium sp. CAG:729 RepID=R7LJX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE88950.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
js4906-20-3_S2_scaffold_2_10
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

7295..8719
DNA (1425bp) protein (475aa)
Uncharacterized protein Tax=Clostridium sp. CAG:967 RepID=R5KE15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY63359.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
hypothetical protein
js4906-20-3_S2_scaffold_2_11
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(8750..9142)
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7MGC3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE98993.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-20-3_S2_scaffold_2_12
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(9327..9905)
DNA (579bp) protein (193aa)
translation factor SUA5; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Translation factor SUA5 {ECO:0000313|EMBL:CCZ51509.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
Sua5/YciO/YrdC/YwlC family protein
js4906-20-3_S2_scaffold_2_13
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(9905..11521)
DNA (1617bp) protein (539aa)
Integral membrane protein MviN Tax=Brachyspira sp. CAG:484 RepID=R5HF40_9SPIR
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
hypothetical protein
js4906-20-3_S2_scaffold_2_14
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(11499..13184)
DNA (1686bp) protein (562aa)
SpoIID/LytB domain protein Tax=Clostridium sp. CAG:768 RepID=R7I2B0_9CLOT
SpoIID/LytB domain protein {ECO:0000313|EMBL:CDE45398.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
SpoIID/LytB domain-containing protein
js4906-20-3_S2_scaffold_2_15
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(13166..14545)
DNA (1380bp) protein (460aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase Tax=Fusobacterium sp. CAG:439 RepID=R7JAG7_9FUSO
js4906-20-3_S2_scaffold_2_16
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(14654..16255)
DNA (1602bp) protein (534aa)
Hydroxylamine reductase 2 Tax=Clostridium sp. CAG:729 RepID=R7LHV2_9CLOT
Hydroxylamine reductase 2 {ECO:0000313|EMBL:CDE88324.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
hybrid cluster protein
js4906-20-3_S2_scaffold_2_17
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

16303..17712
DNA (1410bp) protein (470aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
tRNA modification GTPase MnmE Tax=Fusobacterium sp. CAG:439 RepID=R7J7D2_9FUSO
tRNA modification GTPase TrmE
js4906-20-3_S2_scaffold_2_18
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

17731..18372
DNA (642bp) protein (214aa)
ribE; riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase alpha subunit Tax=Fusobacterium sp. CAG:815 RepID=R7LXD0_9FUSO
Riboflavin synthase alpha subunit {ECO:0000313|EMBL:CDE93165.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-20-3_S2_scaffold_2_19
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

18372..19580
DNA (1209bp) protein (403aa)
sul:SYO3AOP1_1761 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:3.5.4.25); K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
riboflavin biosynthesis protein ribBA (EC:4.1.99.12 3.5.4.25)
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-20-3_S2_scaffold_2_20
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

19591..20577
DNA (987bp) protein (329aa)
Predicted acetyltransferase (GNAT family) Tax=Clostridium sp. CAG:768 RepID=R7HWK6_9CLOT
Predicted acetyltransferase (GNAT family) {ECO:0000313|EMBL:CDE43338.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
js4906-20-3_S2_scaffold_2_21
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

20615..22531
DNA (1917bp) protein (639aa)
seg 225..236 bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CCX80464.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
hypothetical protein
js4906-20-3_S2_scaffold_2_22
unknown

Not on your lists

comp(22528..23436)
DNA (909bp) protein (303aa)

This feature has no annotations

js4906-20-3_S2_scaffold_2_23
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(23466..24779)
DNA (1314bp) protein (438aa)
aac:Aaci_0417 hypothetical protein bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
LPPG:FO 2-phospho-L-lactate transferase
js4906-20-3_S2_scaffold_2_24
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(24817..25611)
DNA (795bp) protein (265aa)
LamB/YcsF family protein (Fragment) Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WJK4_9ACTO bin=MEL_C1 species=Streptomyces himastatinicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=MEL_C1 organism_group=Melainabacteria
UPF0271 protein bcere0007_27620 {ECO:0000313|EMBL:CDE42449.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
hypothetical protein
js4906-20-3_S2_scaffold_2_25
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(25706..26869)
DNA (1164bp) protein (388aa)
FolC bifunctional protein Tax=Clostridium sp. CAG:729 RepID=R7LMG7_9CLOT
FolC bifunctional protein {ECO:0000313|EMBL:CDE89296.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
js4906-20-3_S2_scaffold_2_26
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(26862..27995)
DNA (1134bp) protein (378aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227)
js4906-20-3_S2_scaffold_2_27
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(27979..29187)
DNA (1209bp) protein (403aa)
Cell division-specific peptidoglycan biosynthesis regulator FtsW Tax=Brachyspira sp. CAG:484 RepID=R5H7X2_9SPIR
Cell division-specific peptidoglycan biosynthesis regulator FtsW {ECO:0000313|EMBL:CCY24204.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
FtsW2; cell division membrane protein
js4906-20-3_S2_scaffold_2_28
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(29168..30517)
DNA (1350bp) protein (450aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase Tax=Clostridium sp. CAG:715 RepID=R5DR04_9CLOT
UDP-N-acetylmuramoylalanine/D-glutamate ligase
js4906-20-3_S2_scaffold_2_29
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(30520..31500)
DNA (981bp) protein (327aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase Tax=Clostridium sp. CAG:768 RepID=R7HZX5_9CLOT
phospho-N-acetylmuramoyl-pentapeptide-transferase
js4906-20-3_S2_scaffold_2_30
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(31494..32837)
DNA (1344bp) protein (448aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Tax=Clostridium sp. CAG:768 RepID=R7I2Q9_9CLOT
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
Displaying items 1-30 of 458 in total

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