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js4906-20-3_S2_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 143 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-20-3_S2_scaffold_24_1
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(177..908)
DNA (732bp) protein (244aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5HK50_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25202.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
hypothetical protein
js4906-20-3_S2_scaffold_24_2
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

1002..2786
DNA (1785bp) protein (595aa)
ABC transporter family protein Tax=Fusobacterium sp. CAG:439 RepID=R7J895_9FUSO
ABC transporter family protein {ECO:0000313|EMBL:CDE59112.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
ABC transporter
js4906-20-3_S2_scaffold_24_3
unknown

Not on your lists

comp(2981..3289)
DNA (309bp) protein (103aa)

This feature has no annotations

js4906-20-3_S2_scaffold_24_4
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(3382..4236)
DNA (855bp) protein (285aa)
Putative metal-dependent phosphoesterase PHP family Tax=Clostridium sp. CAG:813 RepID=R7MB11_9CLOT
Putative metal-dependent phosphoesterase PHP family {ECO:0000313|EMBL:CDE97825.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
hypothetical protein
js4906-20-3_S2_scaffold_24_5
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4357..5010
DNA (654bp) protein (218aa)
Uncharacterized protein Tax=Ruminococcus sp. CAG:330 RepID=R7FFV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE13561.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
hypothetical protein
js4906-20-3_S2_scaffold_24_6
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5013..5327
DNA (315bp) protein (105aa)
Cation/cationic drug transporter Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L1P6_METHD
cation/cationic drug transporter
Cation/cationic drug transporter {ECO:0000313|EMBL:AGB50303.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
js4906-20-3_S2_scaffold_24_7
unknown

Not on your lists

comp(5283..6149)
DNA (867bp) protein (289aa)

This feature has no annotations

js4906-20-3_S2_scaffold_24_8
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(6149..7042)
DNA (894bp) protein (298aa)
L-serine dehydratase, iron-sulfur-dependent subunit alpha (EC:4.3.1.17)
L-serine dehydratase iron-sulfur-dependent alpha subunit Tax=Brachyspira sp. CAG:484 RepID=R5H5I8_9SPIR
L-serine dehydratase iron-sulfur-dependent alpha subunit {ECO:0000313|EMBL:CCY24778.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-20-3_S2_scaffold_24_9
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(7045..7716)
DNA (672bp) protein (224aa)
L-serine dehydratase, beta subunit 1..219 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
L-serine ammonia-lyase {ECO:0000313|EMBL:CCY62378.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
L-serine dehydratase, iron-sulfur-dependent, beta subunit
js4906-20-3_S2_scaffold_24_10
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(7735..7977)
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=Clostridium sp. CAG:967 RepID=R5K613_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY62123.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
js4906-20-3_S2_scaffold_24_11
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(7916..8806)
DNA (891bp) protein (297aa)
Uncharacterized protein Tax=Clostridium sp. CAG:967 RepID=R5KM09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY61987.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
nucleotidyltransferase domain-containing protein
js4906-20-3_S2_scaffold_24_12
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(8842..9513)
DNA (672bp) protein (224aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase Tax=Brachyspira sp. CAG:484 RepID=R5HJS2_9SPIR
js4906-20-3_S2_scaffold_24_13
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(9513..10406)
DNA (894bp) protein (298aa)
cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47] bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Cysteine synthase {ECO:0000313|EMBL:CCZ50688.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
cysteine synthase A
js4906-20-3_S2_scaffold_24_14
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(10411..11628)
DNA (1218bp) protein (406aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
Tyrosine--tRNA ligase Tax=Brachyspira sp. CAG:484 RepID=R5HK27_9SPIR
tyrS; tyrosyl-tRNA synthetase
js4906-20-3_S2_scaffold_24_15
unknown

Not on your lists

11777..12133
DNA (357bp) protein (119aa)

This feature has no annotations

js4906-20-3_S2_scaffold_24_16
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(12245..13195)
DNA (951bp) protein (317aa)
coiled-coil 618..642 bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CCX79092.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-20-3_S2_scaffold_24_17
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(13593..14102)
DNA (510bp) protein (170aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
Ferroxidase Tax=Brachyspira sp. CAG:484 RepID=R5H5G5_9SPIR
ferritin-like protein
js4906-20-3_S2_scaffold_24_18
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(14118..14498)
DNA (381bp) protein (127aa)
ferric uptake regulator; K09825 Fur family transcriptional regulator, peroxide stress response regulator bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CCX80930.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
ferric uptake regulator
js4906-20-3_S2_scaffold_24_19
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(14597..15187)
DNA (591bp) protein (197aa)
Probable GTP-binding protein EngB Tax=Clostridium sp. CAG:715 RepID=R5DTN9_9CLOT
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
ysxC; putative ribosome biogenesis GTP-binding protein YsxC
js4906-20-3_S2_scaffold_24_20
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(15157..17073)
DNA (1917bp) protein (639aa)
Tetratricopeptide-like helical 64..332 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
TPR Domain containing protein {ECO:0000313|EMBL:CDE43117.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
TPR domain protein, putative component of TonB system
js4906-20-3_S2_scaffold_24_21
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

17168..18082
DNA (915bp) protein (305aa)
Tyrosine recombinase XerC Tax=Clostridium sp. CAG:729 RepID=R7LMJ9_9CLOT
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
xerD; tyrosine recombinase XerD
js4906-20-3_S2_scaffold_24_22
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

18439..20694
DNA (2256bp) protein (752aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase Tax=Fusobacterium sp. CAG:815 RepID=R7LW62_9FUSO
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CDE91632.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-20-3_S2_scaffold_24_23
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

20711..21313
DNA (603bp) protein (201aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
ribonucleoside-triphosphate reductase class III activase subunit (EC:1.17.4.2 1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein Tax=Clostridium sp. CAG:813 RepID=R7MHL2_9CLOT
js4906-20-3_S2_scaffold_24_24
unknown

Not on your lists

22038..22403
DNA (366bp) protein (122aa)

This feature has no annotations

js4906-20-3_S2_scaffold_24_25
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

22448..23203
DNA (756bp) protein (252aa)
Cob(I)alamin adenosyltransferase (EC:2.5.1.17)
Cob(I)yrinic acid a c-diamide adenosyltransferase Tax=Clostridium sp. CAG:768 RepID=R7HWH8_9CLOT
Cob(I)yrinic acid a c-diamide adenosyltransferase {ECO:0000313|EMBL:CDE42592.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
js4906-20-3_S2_scaffold_24_26
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(23563..24138)
DNA (576bp) protein (192aa)
Transcriptional regulator, TetR family bin=GWF2_OP9_related_35_9 species=Cellulosilyticum lentocellum genus=Cellulosilyticum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
TetR family transcriptional regulator
Tax=GWF2_RBX1_35_9_curated
js4906-20-3_S2_scaffold_24_27
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

24277..24531
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5H5Z6_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25105.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-20-3_S2_scaffold_24_28
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(24517..25872)
DNA (1356bp) protein (452aa)
baf:BAPKO_0772 nox; coenzyme A disulfide reductase; K00359 NADH oxidase [EC:1.6.-.-] bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Similar to pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:CCZ50547.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
NAD(FAD)-dependent dehydrogenase
js4906-20-3_S2_scaffold_24_29
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(25993..27630)
DNA (1638bp) protein (546aa)
Cell surface antigen-like protein Sca13 Tax=Clostridium sp. CAG:715 RepID=R5DW73_9CLOT
Cell surface antigen-like protein Sca13 {ECO:0000313|EMBL:CCX80226.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-20-3_S2_scaffold_24_30
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(27654..29180)
DNA (1527bp) protein (509aa)
Cell surface antigen-like protein Sca13 Tax=Clostridium sp. CAG:715 RepID=R5DW73_9CLOT
Cell surface antigen-like protein Sca13 {ECO:0000313|EMBL:CCX80226.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
Displaying items 1-30 of 143 in total

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