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js4906-20-3_S2_scaffold_118

Search features with annotation key words

Displaying items 1-30 of 63 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-20-3_S2_scaffold_118_1
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(125..1129)
DNA (1005bp) protein (335aa)
Flagellar hook-associated protein 3 Tax=Clostridium sp. CAG:306 RepID=R6P7A3_9CLOT
Flagellar hook-associated protein 3 {ECO:0000313|EMBL:CDC19405.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
flgL; flagellar hook-associated protein 3
js4906-20-3_S2_scaffold_118_2
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(1185..2672)
DNA (1488bp) protein (496aa)
Flagellar hook-associated protein FlgK Tax=Acinetobacter sp. CAG:196 RepID=R5SA06_9GAMM
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:CCZ49848.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
flagellar hook-associated protein 1
js4906-20-3_S2_scaffold_118_3
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(2687..3190)
DNA (504bp) protein (168aa)
Uncharacterized protein Tax=Acinetobacter sp. CAG:196 RepID=R5SG83_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CCZ49849.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
js4906-20-3_S2_scaffold_118_4
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3212..3496)
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Clostridium sp. CAG:306 RepID=R6QBY3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC19402.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
js4906-20-3_S2_scaffold_118_5
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(3520..3867)
DNA (348bp) protein (116aa)
(db=HMMPfam db_id=PF10135 to=110 evalue=2.6e-08 interpro_id=IPR019301 interpro_description=Flagellar protein FlgJ, N-terminal) 59..110 bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Flagellum-specific muramidase {ECO:0000313|EMBL:CCZ49852.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
js4906-20-3_S2_scaffold_118_6
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(3893..4990)
DNA (1098bp) protein (366aa)
Flagellar P-ring protein Tax=Acinetobacter sp. CAG:196 RepID=R5SA11_9GAMM
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
flgI; flagellar basal body P-ring protein
js4906-20-3_S2_scaffold_118_7
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(5010..5633)
DNA (624bp) protein (208aa)
flgH2; flagellar basal body L-ring protein; K02393 flagellar L-ring protein precursor FlgH bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Flagellar basal body L-ring protein {ECO:0000313|EMBL:CCZ49850.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
flagellar basal body L-ring protein
js4906-20-3_S2_scaffold_118_8
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(5660..6331)
DNA (672bp) protein (224aa)
Flagella basal body P-ring formation protein FlgA Tax=Acinetobacter sp. CAG:196 RepID=R5SG88_9GAMM
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
js4906-20-3_S2_scaffold_118_9
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(6378..7163)
DNA (786bp) protein (262aa)
flgG; flagellar basal body rod protein FlgG; K02392 flagellar basal-body rod protein FlgG bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Flagellar basal-body rod protein FlgG {ECO:0000313|EMBL:CCZ49855.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
flagellar basal-body rod protein FlgG
js4906-20-3_S2_scaffold_118_10
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(7212..8024)
DNA (813bp) protein (271aa)
Flagellar basal-body rod protein FlgF Tax=Acinetobacter sp. CAG:196 RepID=R5SSW8_9GAMM
Flagellar basal-body rod protein FlgF {ECO:0000313|EMBL:CCZ49856.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
flagellar basal-body rod protein FlgF
js4906-20-3_S2_scaffold_118_11
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(8024..8602)
DNA (579bp) protein (193aa)
lytic transglycosylase bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
YjbJ {ECO:0000313|EMBL:CCZ49857.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
lytic transglycosylase
js4906-20-3_S2_scaffold_118_12
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

9074..11068
DNA (1995bp) protein (665aa)
cls:CXIVA_24290 Lig; NAD-dependent DNA ligase; K01972 DNA ligase (NAD+) [EC:6.5.1.2] bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
ligA; NAD-dependent DNA ligase LigA
js4906-20-3_S2_scaffold_118_13
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

11117..11392
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=Clostridium sp. CAG:967 RepID=R5K9R8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY63468.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
js4906-20-3_S2_scaffold_118_14
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

11521..12264
DNA (744bp) protein (248aa)
Uncharacterized protein Tax=Clostridium sp. CAG:967 RepID=R5KEC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY63469.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
outer membrane protein
js4906-20-3_S2_scaffold_118_15
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(12479..12802)
DNA (324bp) protein (108aa)
Thioredoxin Tax=Clostridium sp. CAG:768 RepID=R7I0E0_9CLOT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
thioredoxin
js4906-20-3_S2_scaffold_118_16
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

12918..13835
DNA (918bp) protein (306aa)
polC; DNA polymerase III PolC (EC:2.7.7.7); K03763 DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
polC; DNA polymerase III PolC (EC:2.7.7.7)
DNA polymerase III polC-type {ECO:0000313|EMBL:CCY63313.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
js4906-20-3_S2_scaffold_118_17
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

13838..15292
DNA (1455bp) protein (485aa)
Regulatory protein UhpC-like protein Tax=Clostridium sp. CAG:967 RepID=R5KQT2_9CLOT
Regulatory protein UhpC-like protein {ECO:0000313|EMBL:CCY63312.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
regulatory protein UhpC
js4906-20-3_S2_scaffold_118_18
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

15306..15998
DNA (693bp) protein (231aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
guanylate kinase (EC:2.7.4.8)
Guanylate kinase Tax=Acinetobacter sp. CAG:196 RepID=R5S879_9GAMM
js4906-20-3_S2_scaffold_118_19
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

16102..16527
DNA (426bp) protein (142aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
Putative GTP cyclohydrolase 1 type 2 Tax=Clostridium sp. CAG:813 RepID=R7MCZ5_9CLOT
NGG1p interacting factor 3 protein, NIF3
js4906-20-3_S2_scaffold_118_20
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

16499..17062
DNA (564bp) protein (188aa)
Uncharacterized protein Tax=Acinetobacter sp. CAG:196 RepID=R5SUE8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CCZ50401.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
js4906-20-3_S2_scaffold_118_21
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

17068..18393
DNA (1326bp) protein (442aa)
Putative multidrug resistance protein NorM (Na(+)/drug antiporter) Tax=Clostridium sp. CAG:715 RepID=R5DVW3_9CLOT
Putative multidrug resistance protein NorM (Na(+)/drug antiporter) {ECO:0000313|EMBL:CCX80822.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
norM; putative multidrug resistance protein NorM (Na(+)/drug antiporter)
js4906-20-3_S2_scaffold_118_22
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(18437..20347)
DNA (1911bp) protein (637aa)
S-layer domain-containing protein Tax=Clostridium sp. CAG:715 RepID=R5DIN6_9CLOT
S-layer domain-containing protein {ECO:0000313|EMBL:CCX80095.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
S-layer domain-containing protein
js4906-20-3_S2_scaffold_118_23
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

20562..21593
DNA (1032bp) protein (344aa)
hypothetical protein bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CCX80708.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
hypothetical protein
js4906-20-3_S2_scaffold_118_24
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(21705..22535)
DNA (831bp) protein (277aa)
glycosyl transferase, family 4, conserved region; K13685 UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase [EC:2.7.8.-] bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Glycosyl transferase family 4 {ECO:0000313|EMBL:CCZ50997.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
hypothetical protein
js4906-20-3_S2_scaffold_118_25
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(22830..24068)
DNA (1239bp) protein (413aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
Serine hydroxymethyltransferase Tax=Clostridium sp. CAG:967 RepID=R5K616_9CLOT
glyA; serine hydroxymethyltransferase
js4906-20-3_S2_scaffold_118_26
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(24194..24790)
DNA (597bp) protein (199aa)
transmembrane_regions 63..85 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Peptidoglycan-binding lysin domain protein {ECO:0000313|EMBL:CDE89678.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
js4906-20-3_S2_scaffold_118_27
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

24976..26646
DNA (1671bp) protein (557aa)
TPR repeat-containing protein Tax=Clostridium sp. CAG:967 RepID=R5KB05_9CLOT
TPR repeat-containing protein {ECO:0000313|EMBL:CCY63938.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
hypothetical protein
js4906-20-3_S2_scaffold_118_28
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

26780..27898
DNA (1119bp) protein (373aa)
Rhs family protein Tax=Fusobacterium sp. CAG:439 RepID=R7J8X4_9FUSO
Rhs family protein {ECO:0000313|EMBL:CDE60196.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
js4906-20-3_S2_scaffold_118_29
unknown

Not on your lists

comp(27910..28155)
DNA (246bp) protein (82aa)

This feature has no annotations

js4906-20-3_S2_scaffold_118_30
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

28400..28816
DNA (417bp) protein (139aa)
Putative uncharacterized protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XW25_9BACT bin=MEL_C1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=MEL_C1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CDE44046.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
hypothetical protein
Displaying items 1-30 of 63 in total

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