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js4906-20-3_S2_scaffold_133

Search features with annotation key words

Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-20-3_S2_scaffold_133_1
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(207..1439)
DNA (1233bp) protein (411aa)
AAA ATPase central domain protein Tax=Clostridium sp. CAG:715 RepID=R5DUL0_9CLOT
AAA ATPase central domain protein {ECO:0000313|EMBL:CCX80392.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
AAA ATPase
js4906-20-3_S2_scaffold_133_2
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

1475..2713
DNA (1239bp) protein (413aa)
Extracellular solute-binding protein family 1 Tax=Brachyspira sp. CAG:484 RepID=R5H5A9_9SPIR
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CCY24880.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
sugar ABC transporter substrate-binding protein
js4906-20-3_S2_scaffold_133_3
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

2827..5292
DNA (2466bp) protein (822aa)
amu:Amuc_1285 DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
gyrB; DNA gyrase subunit B
js4906-20-3_S2_scaffold_133_4
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

5327..5983
DNA (657bp) protein (219aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
nucleoside-triphosphate--adenylate kinase (EC:2.7.4.10)
Adenylate kinase Tax=Clostridium sp. CAG:813 RepID=R7MBW5_9CLOT
js4906-20-3_S2_scaffold_133_5
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

5976..6737
DNA (762bp) protein (254aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
map; Methionine aminopeptidase 1 (EC:3.4.11.18)
Methionine aminopeptidase (Fragment) Tax=Ascaris suum RepID=F1LEW1_ASCSU bin=MEL_C2 species=Ascaris suum genus=Ascaris taxon_order=Ascaridida taxon_class=Chromadorea phylum=Nematoda tax=MEL_C2 organism_group=Melainabacteria
js4906-20-3_S2_scaffold_133_6
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

6822..7592
DNA (771bp) protein (257aa)
Transporter, MotA/TolQ/ExbB proton channel family Tax=Teredinibacter turnerae T7901 RepID=C5BSH9_TERTT bin=MEL_C2 species=Teredinibacter turnerae genus=Teredinibacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=MEL_C2 organism_group=Melainabacteria
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:CCZ51209.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
MotA/TolQ/ExbB proton channel
js4906-20-3_S2_scaffold_133_7
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7595..8731
DNA (1137bp) protein (379aa)
OmpA/MotB domain protein Tax=Clostridium sp. CAG:306 RepID=R6P0T8_9CLOT
OmpA/MotB domain protein {ECO:0000313|EMBL:CDC17988.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
OmpA/MotB domain-containing protein
js4906-20-3_S2_scaffold_133_8
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

8734..9369
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7MGW8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE98997.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-20-3_S2_scaffold_133_9
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

9480..10430
DNA (951bp) protein (317aa)
Uncharacterized protein Tax=Clostridium sp. CAG:768 RepID=R7HYA4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE43953.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
js4906-20-3_S2_scaffold_133_10
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

10529..11365
DNA (837bp) protein (279aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
Probable inorganic polyphosphate/ATP-NAD kinase Tax=Clostridium sp. CAG:967 RepID=R5KQ41_9CLOT
inorganic polyphosphate/ATP-NAD kinase
js4906-20-3_S2_scaffold_133_11
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

11344..12996
DNA (1653bp) protein (551aa)
DNA repair protein RecN Tax=Clostridium sp. CAG:768 RepID=R7HVR1_9CLOT
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
DNA repair protein RecN
js4906-20-3_S2_scaffold_133_12
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

13631..15226
DNA (1596bp) protein (532aa)
Uncharacterized protein Tax=Clostridium sp. CAG:729 RepID=R7LNL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE89273.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
js4906-20-3_S2_scaffold_133_13
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15265..16557
DNA (1293bp) protein (431aa)
HipA-like protein Tax=Acidiphilium sp. PM RepID=F7SBK5_9PROT
HipA-like protein {ECO:0000313|EMBL:EGO93452.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
hypothetical protein
js4906-20-3_S2_scaffold_133_14
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16565..17920
DNA (1356bp) protein (452aa)
HipA-like protein Tax=Acidiphilium sp. PM RepID=F7SBK5_9PROT
hypothetical protein
HipA-like protein {ECO:0000313|EMBL:EGO93452.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
js4906-20-3_S2_scaffold_133_15
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(18006..19010)
DNA (1005bp) protein (335aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
gap-1; glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.-)
Glyceraldehyde-3-phosphate dehydrogenase type I Tax=Clostridium sp. CAG:768 RepID=R7HZN3_9CLOT
js4906-20-3_S2_scaffold_133_16
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(19107..19808)
DNA (702bp) protein (234aa)
Uncharacterized protein Tax=Clostridium sp. CAG:729 RepID=R7LJ21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE88081.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
js4906-20-3_S2_scaffold_133_17
unknown

Not on your lists

19917..20099
DNA (183bp) protein (61aa)

This feature has no annotations

js4906-20-3_S2_scaffold_133_18
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(20229..21236)
DNA (1008bp) protein (336aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase Tax=Brachyspira sp. CAG:484 RepID=R5H919_9SPIR
Tryptophan--tRNA ligase {ECO:0000313|EMBL:CCY24569.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-20-3_S2_scaffold_133_19

Not on your lists

comp(21266..22078)
DNA (813bp) protein (271aa)
putative enzyme (3.4.-); K06889 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Uncharacterized protein {ECO:0000313|EMBL:EKE02095.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
conserved protein of unknown function
js4906-20-3_S2_scaffold_133_20
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(22206..25037)
DNA (2832bp) protein (944aa)
UvrABC system protein A Tax=Brachyspira sp. CAG:484 RepID=R5H2M8_9SPIR
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
uvrA; excinuclease ABC subunit A
js4906-20-3_S2_scaffold_133_21
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

25168..26046
DNA (879bp) protein (293aa)
Phospholipase C Tax=Brachyspira sp. CAG:484 RepID=R5HH58_9SPIR
Phospholipase C {ECO:0000313|EMBL:CCY24147.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-20-3_S2_scaffold_133_22
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists


26221..26985
DNA (765bp) protein (255aa)
30S ribosomal protein S2 Tax=Fusobacterium sp. CAG:815 RepID=R7LRT0_9FUSO
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
rpsB; 30S ribosomal protein S2
js4906-20-3_S2_scaffold_133_23
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

26997..27857
DNA (861bp) protein (287aa)
Elongation factor Ts Tax=Acinetobacter sp. CAG:196 RepID=R5SGE3_9GAMM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
translation elongation factor Ts
js4906-20-3_S2_scaffold_133_24
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists


comp(28013..28204)
DNA (192bp) protein (64aa)
50S ribosomal protein L28 Tax=Thermotoga RepID=RL28_THEMA bin=MEL_C1 species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=MEL_C1 organism_group=Melainabacteria
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
rpmB; 50S ribosomal protein L28
js4906-20-3_S2_scaffold_133_25
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(28280..29812)
DNA (1533bp) protein (511aa)
Alpha-amylase putative Tax=Clostridium sp. CAG:967 RepID=R5KQB6_9CLOT
Alpha-amylase putative {ECO:0000313|EMBL:CCY63316.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
1,4-alpha-glucan branching enzyme
js4906-20-3_S2_scaffold_133_26
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(29919..30884)
DNA (966bp) protein (322aa)
Protein-export membrane protein SecF Tax=Brachyspira sp. CAG:484 RepID=R5H240_9SPIR
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
protein translocase subunit secF
js4906-20-3_S2_scaffold_133_27
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(30895..32196)
DNA (1302bp) protein (434aa)
secD; protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
secD; protein-export membrane protein SecD
js4906-20-3_S2_scaffold_133_28
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(32283..33176)
DNA (894bp) protein (298aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase Tax=Clostridium sp. CAG:768 RepID=R7HV48_9CLOT
js4906-20-3_S2_scaffold_133_29
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

33330..33947
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=Clostridium sp. CAG:715 RepID=R5DSC0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX79562.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-20-3_S2_scaffold_133_30
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

33932..34891
DNA (960bp) protein (320aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5H244_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY23765.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
Displaying items 1-30 of 34 in total

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