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js4906-20-3_S2_scaffold_563

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-20-3_S2_scaffold_563_1
Clostridium sp. CAG:768, Melainabacteria, Bacteria

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comp(637..1035)
DNA (399bp) protein (133aa)
ATP synthase epsilon chain Tax=Clostridium sp. CAG:768 RepID=R7I0Q6_9CLOT
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
atpC; F0F1 ATP synthase subunit epsilon
js4906-20-3_S2_scaffold_563_2
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

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comp(1060..2466)
DNA (1407bp) protein (469aa)
abb:ABBFA_003365 atpD; F0F1 ATP synthase subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
ATP synthase subunit beta
js4906-20-3_S2_scaffold_563_3
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

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2624..3484
DNA (861bp) protein (287aa)
Uridine kinase Tax=Fusobacterium sp. CAG:439 RepID=R7JEC5_9FUSO
Uridine kinase {ECO:0000313|EMBL:CDE62264.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
js4906-20-3_S2_scaffold_563_4
Clostridium sp. CAG:715, Melainabacteria, Bacteria

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comp(3569..4321)
DNA (753bp) protein (251aa)
transmembrane_regions 68..90 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CCX80428.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-20-3_S2_scaffold_563_5
unknown

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comp(4372..4800)
DNA (429bp) protein (143aa)

This feature has no annotations

js4906-20-3_S2_scaffold_563_6
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

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4979..5143
DNA (165bp) protein (55aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5H5C7_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24703.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-20-3_S2_scaffold_563_7
Clostridium sp. CAG:729, Melainabacteria, Bacteria

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5171..7036
DNA (1866bp) protein (622aa)
Diguanylate cyclase with Chase2 sensor Tax=Clostridium sp. CAG:729 RepID=R7LK18_9CLOT
Diguanylate cyclase with Chase2 sensor {ECO:0000313|EMBL:CDE88411.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
chase2 sensor-containing diguanylate cyclase
js4906-20-3_S2_scaffold_563_8
Clostridium sp. CAG:729, Melainabacteria, Bacteria

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comp(7064..8155)
DNA (1092bp) protein (364aa)
UniRef90_D4S0D0 Deoxyguanosinetriphosphate triphosphohydrolase-like protein Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S0D0_9FIRM bin=MEL_C1 species=Butyrivibrio crossotus genus=Butyrivibrio taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=MEL_C1 organism_group=Melainabacteria
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000313|EMBL:CDE88650.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
deoxyguanosinetriphosphate triphosphohydrolase
js4906-20-3_S2_scaffold_563_9
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

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8232..9476
DNA (1245bp) protein (415aa)
LL-diaminopimelate aminotransferase Tax=Acinetobacter sp. CAG:196 RepID=R5SEC4_9GAMM
LL-diaminopimelate aminotransferase {ECO:0000313|EMBL:CCZ51493.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
putative class I and II aminotransferase
js4906-20-3_S2_scaffold_563_10
Clostridium sp. CAG:729, Melainabacteria, Bacteria

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9466..10842
DNA (1377bp) protein (459aa)
RNA methyltransferase TrmA family Tax=Clostridium sp. CAG:729 RepID=R7LLA7_9CLOT
RNA methyltransferase TrmA family {ECO:0000313|EMBL:CDE89539.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
TrmA family RNA methyltransferase
js4906-20-3_S2_scaffold_563_11
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists


10914..11414
DNA (501bp) protein (167aa)
50S ribosomal protein L9 Tax=Clostridium sp. CAG:768 RepID=R7HZ97_9CLOT
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
rplI; 50S ribosomal protein L9
js4906-20-3_S2_scaffold_563_12
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

11488..12240
DNA (753bp) protein (251aa)
Cobyrinic acid a c-diamide synthase Tax=Clostridium sp. CAG:768 RepID=R7HY35_9CLOT
Cobyrinic acid a c-diamide synthase {ECO:0000313|EMBL:CDE44245.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
cobyrinic acid ac-diamide synthase
js4906-20-3_S2_scaffold_563_13
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

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12240..13076
DNA (837bp) protein (279aa)
Bifunctional protein FolD Tax=Fusobacterium sp. CAG:815 RepID=R7LVM1_9FUSO
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
folD; Bifunctional methylenetetrahydrofolate dehydrogenase (NADP+)/methenyltetrahydrofolate cyclohydrolase protein FolD
js4906-20-3_S2_scaffold_563_14
unknown

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comp(13137..13472)
DNA (336bp) protein (112aa)

This feature has no annotations

Displaying 14 items

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