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js4906-20-4_S3_scaffold_544

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-20-4_S3_scaffold_544_1
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(225..1934)
DNA (1710bp) protein (570aa)
MutS2 protein Tax=Prevotella sp. CAG:873 RepID=R7J0M6_9BACT
MutS2 protein {ECO:0000313|EMBL:CDE57400.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
Mismatch repair ATPase (MutS family)
js4906-20-4_S3_scaffold_544_2
Porphyromonas gingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1984..2682)
DNA (699bp) protein (233aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257).;"
Endonuclease MutS2 Tax=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) RepID=B2RL55_PORG3
DNA mismatch repair protein MutS
js4906-20-4_S3_scaffold_544_3
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2837..6901)
DNA (4065bp) protein (1355aa)
Uncharacterized protein Tax=Prevotella sp. CAG:873 RepID=R7IZ05_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE56889.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
hypothetical protein
js4906-20-4_S3_scaffold_544_4
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7344..8069)
DNA (726bp) protein (242aa)
Molybdopterin-guanine dinucleotide biosynthesis protein B Tax=Prevotella sp. CAG:873 RepID=R7IZX0_9BACT
Molybdopterin-guanine dinucleotide biosynthesis protein B {ECO:0000313|EMBL:CDE56888.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
Dinucleotide-utilizing enzyme
js4906-20-4_S3_scaffold_544_5
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8186..9361)
DNA (1176bp) protein (392aa)
Thiazole biosynthesis protein ThiH Tax=Prevotella sp. CAG:873 RepID=R7J1Z0_9BACT
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:CDE56887.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
thiH; thiamine biosynthesis protein ThiH
js4906-20-4_S3_scaffold_544_6
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9440..11155)
DNA (1716bp) protein (572aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
Phosphomethylpyrimidine synthase Tax=Prevotella sp. CAG:873 RepID=R7IZB0_9BACT
phosphomethylpyrimidine synthase
js4906-20-4_S3_scaffold_544_7
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11229..12008)
DNA (780bp) protein (260aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Thiazole synthase Tax=Bacteroides sp. CAG:20 RepID=R5EUY3_9BACE
thiazole synthase
js4906-20-4_S3_scaffold_544_8
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12079..13365)
DNA (1287bp) protein (429aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
Thiamine-phosphate synthase Tax=Prevotella sp. CAG:873 RepID=R7IZ01_9BACT
thiamine-phosphate pyrophosphorylase
js4906-20-4_S3_scaffold_544_9
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13355..13555)
DNA (201bp) protein (67aa)
Thiamine biosynthesis protein ThiS Tax=Prevotella sp. CAG:873 RepID=R7J1Y6_9BACT
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:CDE56882.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
thiamine biosynthesis protein this
js4906-20-4_S3_scaffold_544_10
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13646..14584)
DNA (939bp) protein (313aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase Tax=Prevotella sp. CAG:873 RepID=R7IZA5_9BACT
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CDE56881.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
js4906-20-4_S3_scaffold_544_11
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14903..15880
DNA (978bp) protein (326aa)
Uncharacterized protein Tax=Prevotella sp. CAG:873 RepID=R7IZ57_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE56880.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
js4906-20-4_S3_scaffold_544_12
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15961..16308
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Prevotella sp. CAG:873 RepID=R7IYZ7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE56879.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
hypothetical protein
js4906-20-4_S3_scaffold_544_13
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16305..16739
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=Prevotella sp. CAG:279 RepID=R7HND1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE40885.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
js4906-20-4_S3_scaffold_544_14
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16699..17712)
DNA (1014bp) protein (338aa)
Antioxidant AhpC/TSA family Tax=Prevotella sp. CAG:873 RepID=R7IZW3_9BACT
Antioxidant AhpC/TSA family {ECO:0000313|EMBL:CDE56878.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
putative thiol:disulfide oxidoreductase
js4906-20-4_S3_scaffold_544_15
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17853..19559
DNA (1707bp) protein (569aa)
Uncharacterized protein Tax=Prevotella sp. CAG:873 RepID=R7J1Y1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE56877.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
long-chain fatty acid--CoA ligase
js4906-20-4_S3_scaffold_544_16
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19682..21046
DNA (1365bp) protein (455aa)
Transporter Tax=Prevotella sp. CAG:873 RepID=R7IZA0_9BACT
Transporter {ECO:0000256|RuleBase:RU003732}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
Na+-dependent transporter
js4906-20-4_S3_scaffold_544_17
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21157..21885
DNA (729bp) protein (243aa)
Uncharacterized protein Tax=Prevotella sp. CAG:873 RepID=R7IZ52_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE56875.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
SprT-like family protein
Displaying 17 items

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