ggKbase home page

js4906-23-3_S14_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-23-3_S14_scaffold_39_1
unknown

Not on your lists

1402..2004
DNA (603bp) protein (201aa)

This feature has no annotations

js4906-23-3_S14_scaffold_39_2
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(2087..3076)
DNA (990bp) protein (330aa)
glutathione synthase (EC:6.3.2.3)
Glutathione synthetase Tax=Fusobacterium sp. CAG:815 RepID=R7LSF4_9FUSO
Glutathione synthetase {ECO:0000313|EMBL:CDE91470.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_39_3
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(3097..3762)
DNA (666bp) protein (222aa)
UPF0173 metal-dependent hydrolase Deipr_0117 Tax=Clostridium sp. CAG:813 RepID=R7MJS5_9CLOT
UPF0173 metal-dependent hydrolase Deipr_0117 {ECO:0000313|EMBL:CDE99982.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
hypothetical protein
js4906-23-3_S14_scaffold_39_4
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

3857..4882
DNA (1026bp) protein (342aa)
Riboflavin biosynthesis protein RibD Tax=Fusobacterium sp. CAG:815 RepID=R7LVQ6_9FUSO
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
riboflavin biosynthesis protein
js4906-23-3_S14_scaffold_39_5
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(4879..5616)
DNA (738bp) protein (246aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein Tax=Clostridium sp. CAG:813 RepID=R7MCY4_9CLOT
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:CDE97758.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-23-3_S14_scaffold_39_6
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

5724..5891
DNA (168bp) protein (56aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LUL3_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE91433.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_39_7
unknown

Not on your lists

comp(5960..6625)
DNA (666bp) protein (222aa)

This feature has no annotations

js4906-23-3_S14_scaffold_39_8
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(6861..7748)
DNA (888bp) protein (296aa)
Uncharacterized protein Tax=Clostridium sp. CAG:715 RepID=R5DLB2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX79579.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-23-3_S14_scaffold_39_9
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(7915..8778)
DNA (864bp) protein (288aa)
Elongation factor Ts Tax=Fusobacterium sp. CAG:815 RepID=R7LUU8_9FUSO
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
translation elongation factor Ts
js4906-23-3_S14_scaffold_39_10
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists


comp(8887..9651)
DNA (765bp) protein (255aa)
30S ribosomal protein S2 Tax=Fusobacterium sp. CAG:815 RepID=R7LRT0_9FUSO
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
rpsB; 30S ribosomal protein S2
js4906-23-3_S14_scaffold_39_11
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(9833..12067)
DNA (2235bp) protein (745aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LX71_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE92323.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_39_12
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

12230..12907
DNA (678bp) protein (226aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7MD17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE97808.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-23-3_S14_scaffold_39_13
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

13131..13706
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LVM4_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE91763.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
6-pyruvoyl-tetrahydropterin synthase
js4906-23-3_S14_scaffold_39_14
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

13821..14471
DNA (651bp) protein (217aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LW08_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE91918.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_39_15
unknown

Not on your lists

comp(14486..15250)
DNA (765bp) protein (255aa)

This feature has no annotations

js4906-23-3_S14_scaffold_39_16
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

15944..16285
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7MD92_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE97898.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
hypothetical protein
js4906-23-3_S14_scaffold_39_17
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists


comp(16355..16621)
DNA (267bp) protein (89aa)
30S ribosomal protein S20 Tax=Clostridium sp. CAG:813 RepID=R7MHY1_9CLOT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
30S ribosomal protein S20
js4906-23-3_S14_scaffold_39_18
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(16858..17853)
DNA (996bp) protein (332aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7MEK9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE98187.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-23-3_S14_scaffold_39_19
unknown

Not on your lists

comp(17861..18436)
DNA (576bp) protein (192aa)

This feature has no annotations

js4906-23-3_S14_scaffold_39_20
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(18452..19894)
DNA (1443bp) protein (481aa)
Outer membrane protein Tax=Clostridium sp. CAG:729 RepID=R7LJL0_9CLOT
Outer membrane protein {ECO:0000313|EMBL:CDE87898.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
Hep_Hag repeat-containing outer membrane protein
js4906-23-3_S14_scaffold_39_21
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(20060..21205)
DNA (1146bp) protein (382aa)
S-layer domain-containing protein Tax=Fusobacterium sp. CAG:815 RepID=R7LWR2_9FUSO
S-layer domain-containing protein {ECO:0000313|EMBL:CDE92188.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
putative S-layer protein
js4906-23-3_S14_scaffold_39_22
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

21378..22049
DNA (672bp) protein (224aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LTN0_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE92189.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_39_23
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(22066..22386)
DNA (321bp) protein (107aa)
CutA1 divalent ion tolerance protein Tax=Clostridium sp. CAG:967 RepID=R5KEV1_9CLOT
CutA1 divalent ion tolerance protein {ECO:0000313|EMBL:CCY63619.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
uncharacterized protein involved in tolerance to divalent cations
js4906-23-3_S14_scaffold_39_24
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

22477..23238
DNA (762bp) protein (254aa)
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 Tax=Clostridium sp. CAG:813 RepID=R7M9U2_9CLOT
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 {ECO:0000313|EMBL:CDE97824.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
dinucleotide-utilizing protein
js4906-23-3_S14_scaffold_39_25
unknown

Not on your lists

23312..24355
DNA (1044bp) protein (348aa)

This feature has no annotations

js4906-23-3_S14_scaffold_39_26
Methanobrevibacter ruminantium, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24594..25259)
DNA (666bp) protein (222aa)
ung; uracil-DNA glycosylase Ung (EC:3.2.2.-)
Uracil-DNA glycosylase Ung {ECO:0000313|EMBL:ADC46070.1}; EC=3.2.2.- {ECO:0000313|EMBL:ADC46070.1};; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM; 13430 / M1) (Methanobacterium ruminantium).;"
Uracil-DNA glycosylase Ung Tax=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) RepID=D3DZB5_METRM
js4906-23-3_S14_scaffold_39_27
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

25435..26418
DNA (984bp) protein (328aa)
Uncharacterized protein Tax=Clostridium sp. CAG:715 RepID=R5DN71_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX80224.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
hypothetical protein
js4906-23-3_S14_scaffold_39_28
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(26415..26933)
DNA (519bp) protein (173aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LV99_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE91673.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_39_29
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

27134..27883
DNA (750bp) protein (250aa)
Probable transcriptional regulatory protein BN790_00716 Tax=Clostridium sp. CAG:813 RepID=R7MB76_9CLOT
Probable transcriptional regulatory protein BN790_00716 {ECO:0000256|HAMAP-Rule:MF_00693}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
hypothetical protein
js4906-23-3_S14_scaffold_39_30
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

27886..29136
DNA (1251bp) protein (417aa)
Diguanylate cyclase Tax=Fusobacterium sp. CAG:815 RepID=R7LVV1_9FUSO
Diguanylate cyclase {ECO:0000313|EMBL:CDE92186.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
PAS/PAC sensor-containing diguanylate cyclase
Displaying items 1-30 of 133 in total

View Taxonomy