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js4906-23-3_S14_scaffold_54

Search features with annotation key words

Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-23-3_S14_scaffold_54_1
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

2..268
DNA (267bp) protein (89aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7MAU1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE97735.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-23-3_S14_scaffold_54_2
unknown

Not on your lists

275..937
DNA (663bp) protein (221aa)

This feature has no annotations

js4906-23-3_S14_scaffold_54_3
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(1052..2251)
DNA (1200bp) protein (400aa)
Iron-containing alcohol dehydrogenase Tax=Clostridium sp. CAG:813 RepID=R7MDF3_9CLOT
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:CDE97747.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
iron-containing alcohol dehydrogenase
js4906-23-3_S14_scaffold_54_4
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(2493..2783)
DNA (291bp) protein (97aa)
lambda repressor-like DNA-binding domains 6..85 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Regulatory protein munI {ECO:0000313|EMBL:CDE88311.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
js4906-23-3_S14_scaffold_54_5
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

2831..3616
DNA (786bp) protein (262aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7MB50_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE97875.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-23-3_S14_scaffold_54_6
unknown

Not on your lists

3916..4758
DNA (843bp) protein (281aa)

This feature has no annotations

js4906-23-3_S14_scaffold_54_7
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

4855..6177
DNA (1323bp) protein (441aa)
Sodium:dicarboxylate symporter Tax=Clostridium sp. CAG:813 RepID=R7MCX7_9CLOT
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:CDE97748.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
sodium:dicarboxylate symporter
js4906-23-3_S14_scaffold_54_8
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

6180..8990
DNA (2811bp) protein (937aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
Isoleucine--tRNA ligase Tax=Clostridium sp. CAG:813 RepID=R7M9M8_9CLOT
isoleucyl-tRNA synthetase
js4906-23-3_S14_scaffold_54_9
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

9153..10544
DNA (1392bp) protein (464aa)
Replicative DNA helicase Tax=Clostridium sp. CAG:813 RepID=R7MBN8_9CLOT
Replicative DNA helicase {ECO:0000313|EMBL:CDE97771.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
replicative DNA helicase
js4906-23-3_S14_scaffold_54_10
unknown

Not on your lists

comp(10541..10984)
DNA (444bp) protein (148aa)

This feature has no annotations

js4906-23-3_S14_scaffold_54_11
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

11117..12007
DNA (891bp) protein (297aa)
Cation diffusion facilitator family transporter Tax=Fusobacterium sp. CAG:815 RepID=R7LTX2_9FUSO
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:CDE92259.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
cation efflux family protein
js4906-23-3_S14_scaffold_54_12
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(12000..13325)
DNA (1326bp) protein (442aa)
gshA; glutamate-cysteine ligase (EC:6.3.2.2)
Glutamate--cysteine ligase Tax=Fusobacterium sp. CAG:815 RepID=R7LUU5_9FUSO
Glutamate--cysteine ligase {ECO:0000313|EMBL:CDE92260.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_54_13
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists


13441..14310
DNA (870bp) protein (290aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
Ribosomal RNA small subunit methyltransferase A Tax=Clostridium sp. CAG:813 RepID=R7MCY9_9CLOT
ksgA; dimethyladenosine transferase
js4906-23-3_S14_scaffold_54_14
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

14311..15120
DNA (810bp) protein (270aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Tax=Clostridium sp. CAG:813 RepID=R7MDG9_9CLOT
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
js4906-23-3_S14_scaffold_54_15
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(15374..16525)
DNA (1152bp) protein (384aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=Fusobacterium sp. CAG:815 RepID=R7LWY0_9FUSO
js4906-23-3_S14_scaffold_54_16
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(16538..18259)
DNA (1722bp) protein (574aa)
Two-component hybrid sensor and regulator Tax=Fusobacterium sp. CAG:815 RepID=R7LY61_9FUSO
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:CDE93041.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
multi-sensor hybrid histidine kinase
js4906-23-3_S14_scaffold_54_17
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

18812..19015
DNA (204bp) protein (68aa)
Two component LuxR family transcriptional regulator Tax=Fusobacterium sp. CAG:815 RepID=R7LZA2_9FUSO
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:CDE93038.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
LuxR family transcriptional regulator
js4906-23-3_S14_scaffold_54_18
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

19029..19520
DNA (492bp) protein (164aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7ME76_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE98945.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
Peptidoglycan-binding domain 1 protein
js4906-23-3_S14_scaffold_54_19
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

19532..21052
DNA (1521bp) protein (507aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LZ98_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE93033.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_54_20
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

21104..21958
DNA (855bp) protein (285aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LZX7_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE93022.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
P22 coat protein - protein 5 domain protein
js4906-23-3_S14_scaffold_54_21
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

21977..22225
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7ME71_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE98940.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-23-3_S14_scaffold_54_22
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

22229..22840
DNA (612bp) protein (204aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LWV7_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE93020.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_54_23
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

22918..23556
DNA (639bp) protein (213aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LW17_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE93019.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_54_24
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

23685..24125
DNA (441bp) protein (147aa)
Terminase, small subunit 4..135 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Phage terminase small subunit {ECO:0000313|EMBL:CDE88773.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
terminase small subunit
js4906-23-3_S14_scaffold_54_25
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

24143..24493
DNA (351bp) protein (117aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LZX4_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE93017.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_54_26
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

24499..25014
DNA (516bp) protein (172aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LY40_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE93016.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_54_27
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

24953..26695
DNA (1743bp) protein (581aa)
Portal protein Tax=Fusobacterium sp. CAG:815 RepID=R7LWV3_9FUSO
Portal protein {ECO:0000313|EMBL:CDE93015.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_54_28
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

26712..28001
DNA (1290bp) protein (430aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LW13_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE93014.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_54_29
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

28020..28241
DNA (222bp) protein (74aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5H7X3_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25548.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-23-3_S14_scaffold_54_30
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

28318..28722
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Clostridium sp. CAG:967 RepID=R5K792_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY62523.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
Displaying items 1-30 of 117 in total

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