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js4906-23-3_S14_scaffold_210

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-23-3_S14_scaffold_210_1
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

2..970
DNA (969bp) protein (323aa)
Phospholipid-lipopolysaccharide ABC transporter Tax=Clostridium sp. CAG:967 RepID=R5K6P4_9CLOT
Phospholipid-lipopolysaccharide ABC transporter {ECO:0000313|EMBL:CCY62358.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
ABC transporter
js4906-23-3_S14_scaffold_210_2
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

973..1434
DNA (462bp) protein (154aa)
Transcriptional regulator LuxR family Tax=Fusobacterium sp. CAG:815 RepID=R7LUJ8_9FUSO
Transcriptional regulator LuxR family {ECO:0000313|EMBL:CDE92190.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
LuxR family two component transcriptional regulator
js4906-23-3_S14_scaffold_210_3
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(1452..5327)
DNA (3876bp) protein (1292aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LVV8_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE92191.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_210_4
Helicobacter sp. MIT 05-5293, Helicobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

5536..6555
DNA (1020bp) protein (340aa)
Lipopolysaccharide biosynthesis protein Tax=Clostridium sp. CAG:440 RepID=R7GE20_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGL06811.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.;" source="Helicobacter sp. MIT 05-5293.;"
glycosyl transferase family protein
js4906-23-3_S14_scaffold_210_5
unknown

Not on your lists

comp(7061..7678)
DNA (618bp) protein (206aa)

This feature has no annotations

js4906-23-3_S14_scaffold_210_6
unknown

Not on your lists

comp(7693..8634)
DNA (942bp) protein (314aa)

This feature has no annotations

js4906-23-3_S14_scaffold_210_7
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(8653..9225)
DNA (573bp) protein (191aa)
putative leukotoxin LktA like protein bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CCX80031.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
hypothetical protein
js4906-23-3_S14_scaffold_210_8
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

comp(9246..11396)
DNA (2151bp) protein (717aa)
Ankyrin repeat protein, putative Tax=Trichomonas vaginalis RepID=A2DJY8_TRIVA
Ankyrin repeat protein, putative {ECO:0000313|EMBL:EAY19352.1}; species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
ankyrin
js4906-23-3_S14_scaffold_210_9
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

11556..12947
DNA (1392bp) protein (464aa)
Predicted ATPase Tax=Fusobacterium sp. CAG:439 RepID=R7J7J0_9FUSO
Predicted ATPase {ECO:0000313|EMBL:CDE59815.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
serine/threonine protein kinase
js4906-23-3_S14_scaffold_210_10
unknown

Not on your lists

12947..14365
DNA (1419bp) protein (473aa)

This feature has no annotations

js4906-23-3_S14_scaffold_210_11
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14369..15565
DNA (1197bp) protein (399aa)
Uncharacterized protein Tax=Clostridium sp. CAG:306 RepID=R6P2E1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC18523.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
js4906-23-3_S14_scaffold_210_12

Not on your lists

16349..17485
DNA (1137bp) protein (379aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6PTD9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH98196.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
js4906-23-3_S14_scaffold_210_13
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17482..17823
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Nitratireductor aquibiodomus RA22 RepID=I5BSR5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM72617.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
js4906-23-3_S14_scaffold_210_14
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(17789..18697)
DNA (909bp) protein (303aa)
Uncharacterized protein Tax=Acinetobacter sp. CAG:196 RepID=R5SSL8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CCZ49746.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
js4906-23-3_S14_scaffold_210_15
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(18833..20260)
DNA (1428bp) protein (476aa)
Uncharacterized protein Tax=Acinetobacter sp. CAG:196 RepID=R5S811_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CCZ49745.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
js4906-23-3_S14_scaffold_210_16
unknown

Not on your lists

comp(20247..20504)
DNA (258bp) protein (86aa)

This feature has no annotations

js4906-23-3_S14_scaffold_210_17
unknown

Not on your lists

20698..21408
DNA (711bp) protein (237aa)

This feature has no annotations

js4906-23-3_S14_scaffold_210_18
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

21408..22790
DNA (1383bp) protein (461aa)
Site-specific recombinase XerD Tax=Acinetobacter sp. CAG:196 RepID=R5SXT6_9GAMM
Site-specific recombinase XerD {ECO:0000313|EMBL:CCZ49747.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
site-specific recombinase XerD
js4906-23-3_S14_scaffold_210_19
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22793..23509)
DNA (717bp) protein (239aa)
hypothetical protein Tax=Acetivibrio cellulolyticus RepID=UPI0002481BA1
Uncharacterized protein {ECO:0000313|EMBL:EHL05564.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense DP7.;"
hypothetical protein
js4906-23-3_S14_scaffold_210_20
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

23669..23986
DNA (318bp) protein (106aa)
Transcriptional regulator XRE family Tax=Clostridium sp. CAG:967 RepID=R5KP43_9CLOT
Transcriptional regulator XRE family {ECO:0000313|EMBL:CCY62901.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
XRE family transcriptional regulator
js4906-23-3_S14_scaffold_210_21
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

24033..24977
DNA (945bp) protein (315aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LZJ7_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE92862.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
hypothetical protein
js4906-23-3_S14_scaffold_210_22
GWE2_Gammaproteobacteria_37_16_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25040..27367
DNA (2328bp) protein (776aa)
RloC protein, putative Tax=Campylobacter jejuni subsp. jejuni LMG 23223 RepID=H7XNE2_CAMJU
RloE
Tax=GWE2_Gammaproteobacteria_37_16_curated
js4906-23-3_S14_scaffold_210_23
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

27651..28172
DNA (522bp) protein (174aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7MGW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE99616.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
hypothetical protein
js4906-23-3_S14_scaffold_210_24
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

28200..28619
DNA (420bp) protein (140aa)
GtrA-like protein Tax=Fusobacterium sp. CAG:815 RepID=R7LUR7_9FUSO
GtrA-like protein {ECO:0000313|EMBL:CDE91498.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
GtrA-like protein
js4906-23-3_S14_scaffold_210_25
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(28623..30146)
DNA (1524bp) protein (508aa)
Outer membrane efflux protein Tax=Clostridium sp. CAG:813 RepID=R7MEW1_9CLOT
Outer membrane efflux protein {ECO:0000313|EMBL:CDE99614.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
type I secretion outer membrane protein
js4906-23-3_S14_scaffold_210_26
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(30150..33407)
DNA (3258bp) protein (1086aa)
Transporter hydrophobe/amphiphile efflux-1 (HAE1) family Tax=Clostridium sp. CAG:813 RepID=R7MI12_9CLOT
Transporter hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:CDE99613.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
hydrophobe/amphiphile efflux-1 (HAE1) family protein
js4906-23-3_S14_scaffold_210_27
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(33407..34576)
DNA (1170bp) protein (390aa)
Efflux transporter MFP subunit AcrA/E family protein Tax=Fusobacterium sp. CAG:815 RepID=R7LWY3_9FUSO
Efflux transporter MFP subunit AcrA/E family protein {ECO:0000313|EMBL:CDE92233.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
GntR family transcriptional regulator
js4906-23-3_S14_scaffold_210_28
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

34710..35189
DNA (480bp) protein (160aa)
Transcriptional regulator MarR family Tax=Clostridium sp. CAG:813 RepID=R7MGV9_9CLOT
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDE99611.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-23-3_S14_scaffold_210_29
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(35260..39351)
DNA (4092bp) protein (1364aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LW22_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE92231.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
hypothetical protein
js4906-23-3_S14_scaffold_210_30
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

39443..39985
DNA (543bp) protein (181aa)
tag; DNA-3-methyladenine glycosylase I Tag (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I Tax=Clostridium sp. CAG:813 RepID=R7MG22_9CLOT
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:CDE99600.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
Displaying items 1-30 of 48 in total

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