ggKbase home page

js4906-23-3_S14_scaffold_214

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-23-3_S14_scaffold_214_1
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

1..297
DNA (297bp) protein (99aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase Tax=Fusobacterium sp. CAG:815 RepID=R7LYD5_9FUSO
js4906-23-3_S14_scaffold_214_2
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

297..800
DNA (504bp) protein (168aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LXC6_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE92721.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_214_3
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

821..1762
DNA (942bp) protein (314aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase Tax=Fusobacterium sp. CAG:815 RepID=R7LV91_9FUSO
js4906-23-3_S14_scaffold_214_4
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(1793..2473)
DNA (681bp) protein (227aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7M0F2_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE93423.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_214_5
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

2545..2820
DNA (276bp) protein (92aa)
Transcriptional regulator XRE family Tax=Fusobacterium sp. CAG:439 RepID=R7JD53_9FUSO
Transcriptional regulator XRE family {ECO:0000313|EMBL:CDE60797.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
js4906-23-3_S14_scaffold_214_6
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

2931..3230
DNA (300bp) protein (100aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LW29_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE92725.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_214_7
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

3278..4516
DNA (1239bp) protein (413aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LXD1_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE92726.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
putative esterase of the alpha-beta hydrolase superfamily
js4906-23-3_S14_scaffold_214_8
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4750..5325)
DNA (576bp) protein (192aa)
NADPH-dependent FMN reductase Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LVV1_DESBD
NADPH-dependent FMN reductase
Tax=BJP_08E140C01_Desulfomicrobium_58_14
js4906-23-3_S14_scaffold_214_9
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(5339..6361)
DNA (1023bp) protein (341aa)
Pyruvyl-transferase Tax=Clostridium sp. CAG:813 RepID=R7MK16_9CLOT
Pyruvyl-transferase {ECO:0000313|EMBL:CDF00082.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
polysaccharide pyruvyl transferase CsaB
js4906-23-3_S14_scaffold_214_10
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(6361..7308)
DNA (948bp) protein (316aa)
PfkB domain protein Tax=Clostridium sp. CAG:813 RepID=R7MJE9_9CLOT
PfkB domain protein {ECO:0000313|EMBL:CDF00083.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
PfkB domain-containing protein
js4906-23-3_S14_scaffold_214_11
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(7311..7916)
DNA (606bp) protein (202aa)
Possible 2-keto-3-deoxy-6-phosphogluconate aldolase Tax=Fusobacterium sp. CAG:815 RepID=R7LVC6_9FUSO
Possible 2-keto-3-deoxy-6-phosphogluconate aldolase {ECO:0000313|EMBL:CDE92734.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
eda; possible 2-keto-3-deoxy-6-phosphogluconate aldolase
js4906-23-3_S14_scaffold_214_12
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

7978..9945
DNA (1968bp) protein (656aa)
adenylate cyclase (EC:4.6.1.1)
Adenylate cyclase Tax=Fusobacterium sp. CAG:815 RepID=R7LW67_9FUSO
Adenylate cyclase {ECO:0000313|EMBL:CDE92735.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_214_13
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(10160..10660)
DNA (501bp) protein (167aa)
UPF0234 protein BN791_00606 Tax=Fusobacterium sp. CAG:815 RepID=R7LWP0_9FUSO
UPF0234 protein BN791_00606 {ECO:0000256|HAMAP-Rule:MF_00632}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
hypothetical protein
js4906-23-3_S14_scaffold_214_14
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(10779..11201)
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7MJF3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF00088.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-23-3_S14_scaffold_214_15
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

11315..11626
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7MG64_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF00089.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-23-3_S14_scaffold_214_16
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

11680..12027
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7MHI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF00090.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-23-3_S14_scaffold_214_17
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

12042..14567
DNA (2526bp) protein (842aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LVL4_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE91753.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
hypothetical protein
js4906-23-3_S14_scaffold_214_18
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

14581..16515
DNA (1935bp) protein (645aa)
Ribonuclease E Tax=Fusobacterium sp. CAG:815 RepID=R7LWN6_9FUSO
Ribonuclease E {ECO:0000313|EMBL:CDE91752.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
rne; ribonuclease E
js4906-23-3_S14_scaffold_214_19
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

16502..16810
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LUP7_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE91751.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_214_20
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

16820..17041
DNA (222bp) protein (74aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7MK32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF00097.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-23-3_S14_scaffold_214_21
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

17042..17710
DNA (669bp) protein (223aa)
sdhB; L-serine dehydratase subunit beta (EC:4.3.1.17)
L-serine dehydratase iron-sulfur-dependent beta subunit Tax=Clostridium sp. CAG:813 RepID=R7MJG1_9CLOT
L-serine dehydratase iron-sulfur-dependent beta subunit {ECO:0000313|EMBL:CDF00098.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-23-3_S14_scaffold_214_22
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

17713..18588
DNA (876bp) protein (292aa)
L-serine dehydratase, iron-sulfur-dependent subunit alpha (EC:4.3.1.17)
L-serine dehydratase iron-sulfur-dependent alpha subunit Tax=Fusobacterium sp. CAG:815 RepID=R7LVK9_9FUSO
L-serine dehydratase iron-sulfur-dependent alpha subunit {ECO:0000313|EMBL:CDE91748.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_214_23
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(18785..20326)
DNA (1542bp) protein (514aa)
AAA family ATPase Tax=Clostridium sp. CAG:813 RepID=R7MHK3_9CLOT
AAA family ATPase {ECO:0000313|EMBL:CDF00100.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
hypothetical protein
js4906-23-3_S14_scaffold_214_24
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

20920..22791
DNA (1872bp) protein (624aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase Tax=Fusobacterium sp. CAG:815 RepID=R7LSA3_9FUSO
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDE91699.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_214_25
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

22772..23584
DNA (813bp) protein (271aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase Tax=Fusobacterium sp. CAG:815 RepID=R7LT55_9FUSO
js4906-23-3_S14_scaffold_214_26
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(23573..24562)
DNA (990bp) protein (330aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LUH3_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE91701.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
hypothetical protein
js4906-23-3_S14_scaffold_214_27
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(24543..25976)
DNA (1434bp) protein (478aa)
Cell wall hydrolase/autolysin Tax=Fusobacterium sp. CAG:815 RepID=R7LWG1_9FUSO
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:CDE91702.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
amiA; N-acetylmuramoyl-L-alanine amidase-related protein
js4906-23-3_S14_scaffold_214_28
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

26085..27857
DNA (1773bp) protein (591aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LVD1_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE91703.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
ftsI; penicillin binding protein transpeptidase domain-containing protein
js4906-23-3_S14_scaffold_214_29
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

27875..29350
DNA (1476bp) protein (492aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase Tax=Fusobacterium sp. CAG:815 RepID=R7LSA8_9FUSO
js4906-23-3_S14_scaffold_214_30
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

29304..30257
DNA (954bp) protein (318aa)
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase Tax=Fusobacterium sp. CAG:815 RepID=R7LT61_9FUSO
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000313|EMBL:CDE91705.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
Displaying items 1-30 of 57 in total

View Taxonomy