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js4906-23-3_S14_scaffold_242

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-23-3_S14_scaffold_242_1
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

1..633
DNA (633bp) protein (211aa)
Putative hydrolase NIT3 Tax=Fusobacterium sp. CAG:815 RepID=R7LVL6_9FUSO
Putative hydrolase NIT3 {ECO:0000313|EMBL:CDE92575.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
amidohydrolase
js4906-23-3_S14_scaffold_242_2
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

630..1979
DNA (1350bp) protein (450aa)
D-alanyl-D-alanine carboxypeptidase Tax=Fusobacterium sp. CAG:815 RepID=R7LUR0_9FUSO
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CDE92574.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
dacB; D-alanyl-D-alanine carboxypeptidase
js4906-23-3_S14_scaffold_242_3
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

1996..2871
DNA (876bp) protein (292aa)
Glycosyl transferase Tax=Fusobacterium sp. CAG:815 RepID=R7LYQ1_9FUSO
Glycosyl transferase {ECO:0000313|EMBL:CDE92572.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
cell wall biogenesis glycosyltransferase
js4906-23-3_S14_scaffold_242_4
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

2959..3957
DNA (999bp) protein (333aa)
Oxidoreductase domain protein Tax=Fusobacterium sp. CAG:815 RepID=R7LVL2_9FUSO
Oxidoreductase domain protein {ECO:0000313|EMBL:CDE92570.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
oxidoreductase domain-containing protein
js4906-23-3_S14_scaffold_242_5
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

3973..4611
DNA (639bp) protein (213aa)
CDP-alcohol phosphatidyltransferase Tax=Clostridium sp. CAG:813 RepID=R7MFZ8_9CLOT
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:CDF00024.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
CDP-alcohol phosphatidyltransferase
js4906-23-3_S14_scaffold_242_6
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

4601..5053
DNA (453bp) protein (151aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase Tax=Clostridium sp. CAG:813 RepID=R7MHB5_9CLOT
RNA methyltransferase
js4906-23-3_S14_scaffold_242_7
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

5043..5858
DNA (816bp) protein (272aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
ADP-dependent (S)-NAD(P)H-hydrate dehydratase Tax=Fusobacterium sp. CAG:815 RepID=R7LXU1_9FUSO
hypothetical protein
js4906-23-3_S14_scaffold_242_8
unknown

Not on your lists

comp(5862..6074)
DNA (213bp) protein (71aa)

This feature has no annotations

js4906-23-3_S14_scaffold_242_9
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(6199..6654)
DNA (456bp) protein (152aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00464}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00464};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00464};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00464};; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
S-adenosylmethionine decarboxylase proenzyme Tax=Fusobacterium sp. CAG:815 RepID=R7LUP5_9FUSO
SpeD; S-adenosylmethionine decarboxylase proenzyme
js4906-23-3_S14_scaffold_242_10
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

6870..7568
DNA (699bp) protein (233aa)
Two component transcriptional regulator winged helix family Tax=Fusobacterium sp. CAG:815 RepID=R7LYN8_9FUSO
Two component transcriptional regulator winged helix family {ECO:0000313|EMBL:CDE92557.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
winged helix family two component transcriptional regulator
js4906-23-3_S14_scaffold_242_11
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists


comp(7871..8239)
DNA (369bp) protein (123aa)
30S ribosomal protein S16 Tax=Fusobacterium sp. CAG:815 RepID=R7LVJ4_9FUSO
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
rpsP; 30S ribosomal protein S16
js4906-23-3_S14_scaffold_242_12
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

8493..9815
DNA (1323bp) protein (441aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
tig; trigger factor (EC:5.2.1.8)
Trigger factor Tax=Clostridium sp. CAG:813 RepID=R7MI18_9CLOT
js4906-23-3_S14_scaffold_242_13
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

9862..10452
DNA (591bp) protein (197aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
clpP-2; ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit Tax=Clostridium sp. CAG:813 RepID=R7MJW9_9CLOT
js4906-23-3_S14_scaffold_242_14
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

10476..11783
DNA (1308bp) protein (436aa)
ATP-dependent Clp protease ATP-binding subunit ClpX Tax=Fusobacterium sp. CAG:815 RepID=R7LWT3_9FUSO
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX
js4906-23-3_S14_scaffold_242_15
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

11887..14757
DNA (2871bp) protein (957aa)
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I (POL I) Tax=Fusobacterium sp. CAG:815 RepID=R7LXS6_9FUSO
DNA polymerase I (POL I) {ECO:0000313|EMBL:CDE92548.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_242_16
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

14742..15161
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LYM7_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDF00035.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-23-3_S14_scaffold_242_17
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(15167..15979)
DNA (813bp) protein (271aa)
Hemolysin TlyA family protein Tax=Clostridium sp. CAG:768 RepID=R7HTR3_9CLOT
Hemolysin TlyA family protein {ECO:0000313|EMBL:CDE42363.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
hemolysin A
js4906-23-3_S14_scaffold_242_18
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(15969..16748)
DNA (780bp) protein (260aa)
Hydrolase TatD family Tax=Fusobacterium sp. CAG:815 RepID=R7LUW8_9FUSO
Hydrolase TatD family {ECO:0000313|EMBL:CDE91548.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
yabD; metal-dependent DNase
js4906-23-3_S14_scaffold_242_19

Not on your lists

comp(16813..18759)
DNA (1947bp) protein (649aa)
transmembrane_regions 107..129 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Uncharacterized protein {ECO:0000313|EMBL:EKE02156.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
js4906-23-3_S14_scaffold_242_20
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(18958..20322)
DNA (1365bp) protein (455aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
Glutamine synthetase Tax=Clostridium sp. CAG:813 RepID=R7MC13_9CLOT
glutamine synthetase, type I
js4906-23-3_S14_scaffold_242_21
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(20588..20944)
DNA (357bp) protein (119aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
panD; aspartate alpha-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase Tax=Fusobacterium sp. CAG:815 RepID=R7LY86_9FUSO
js4906-23-3_S14_scaffold_242_22
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists


comp(20973..22709)
DNA (1737bp) protein (579aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00173448};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
proS; prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase Tax=Fusobacterium sp. CAG:815 RepID=R7LVY6_9FUSO
js4906-23-3_S14_scaffold_242_23
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(22870..23793)
DNA (924bp) protein (308aa)
TPR Domain containing protein Tax=Clostridium sp. CAG:813 RepID=R7MET4_9CLOT
TPR Domain containing protein {ECO:0000313|EMBL:CDE98237.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
tetratricopeptide repeat domain-containing protein
js4906-23-3_S14_scaffold_242_24
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(23797..24477)
DNA (681bp) protein (227aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LSP0_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE91550.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
hypothetical protein
js4906-23-3_S14_scaffold_242_25
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

24791..25591
DNA (801bp) protein (267aa)
Purine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01963};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01963};; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
Purine nucleoside phosphorylase Tax=Fusobacterium sp. CAG:815 RepID=R7LUT5_9FUSO
methylthioadenosine phosphorylase
js4906-23-3_S14_scaffold_242_26
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

25604..25969
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LTH7_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE91805.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_242_27
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

25935..26228
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7MGF9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE98817.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
hypothetical protein
js4906-23-3_S14_scaffold_242_28
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

26235..27575
DNA (1341bp) protein (447aa)
TrkA-C domain protein Tax=Fusobacterium sp. CAG:815 RepID=R7LVR2_9FUSO
TrkA-C domain protein {ECO:0000313|EMBL:CDE91803.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
TrkA-C domain-containing protein
js4906-23-3_S14_scaffold_242_29
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

27580..29043
DNA (1464bp) protein (488aa)
Trk system potassium uptake protein Tax=Fusobacterium sp. CAG:815 RepID=R7LWR8_9FUSO
Trk system potassium uptake protein {ECO:0000313|EMBL:CDE91802.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
Trk-type K+ transport system, membrane component
js4906-23-3_S14_scaffold_242_30
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(29396..29998)
DNA (603bp) protein (201aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LV78_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE92714.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
Displaying items 1-30 of 54 in total

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