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js4906-23-3_S14_scaffold_454

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-23-3_S14_scaffold_454_1
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

238..711
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Clostridium sp. CAG:715 RepID=R5DKP8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX80830.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-23-3_S14_scaffold_454_2
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

712..1311
DNA (600bp) protein (200aa)
Uncharacterized protein Tax=Clostridium sp. CAG:967 RepID=R5KNH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY62656.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
js4906-23-3_S14_scaffold_454_3
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(1346..2389)
DNA (1044bp) protein (348aa)
Ankyrin repeat-containing protein Tax=Clostridium sp. CAG:813 RepID=R7MK15_9CLOT
Ankyrin repeat-containing protein {ECO:0000313|EMBL:CDF00258.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
adh; alcohol dehydrogenase
js4906-23-3_S14_scaffold_454_4
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(2389..4050)
DNA (1662bp) protein (554aa)
N-6 DNA Methylase Tax=Fusobacterium sp. CAG:815 RepID=R7LV28_9FUSO
N-6 DNA Methylase {ECO:0000313|EMBL:CDE91921.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
Type I restriction-modification system methyltransferase subunit
js4906-23-3_S14_scaffold_454_5
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

4126..4932
DNA (807bp) protein (269aa)
Peptidase family M48 Tax=Fusobacterium sp. CAG:815 RepID=R7LYL7_9FUSO
Peptidase family M48 {ECO:0000313|EMBL:CDE93206.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_454_6
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

5059..6627
DNA (1569bp) protein (523aa)
Tetratricopeptide repeat family protein Tax=Fusobacterium sp. CAG:815 RepID=R7LY27_9FUSO
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:CDE93385.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
hypothetical protein
js4906-23-3_S14_scaffold_454_7
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(6693..6863)
DNA (171bp) protein (57aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LRE8_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE91379.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_454_8
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(7121..7885)
DNA (765bp) protein (255aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LSA6_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE91410.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_454_9
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

8035..8379
DNA (345bp) protein (115aa)
Transcriptional regulator XRE family Tax=Acinetobacter sp. CAG:196 RepID=R5S9E1_9GAMM
Transcriptional regulator XRE family {ECO:0000313|EMBL:CCZ50270.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
hypothetical protein
js4906-23-3_S14_scaffold_454_10
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(8386..10779)
DNA (2394bp) protein (798aa)
DNA internalization-related competence protein ComEC/Rec2 Tax=Fusobacterium sp. CAG:815 RepID=R7LU14_9FUSO
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:CDE92304.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
DNA internalization-related competence protein ComEC/Rec2
js4906-23-3_S14_scaffold_454_11
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

10866..11966
DNA (1101bp) protein (367aa)
Twitching motility protein PilT Tax=Fusobacterium sp. CAG:815 RepID=R7LX54_9FUSO
Twitching motility protein PilT {ECO:0000313|EMBL:CDE92303.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
pilT; twitching motility protein PilT
js4906-23-3_S14_scaffold_454_12
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

11966..12739
DNA (774bp) protein (258aa)
DNA repair protein RecO Tax=Fusobacterium sp. CAG:815 RepID=R7LY21_9FUSO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
recO; DNA repair protein RecO
js4906-23-3_S14_scaffold_454_13
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

12808..15390
DNA (2583bp) protein (861aa)
Zinc protease Tax=Fusobacterium sp. CAG:815 RepID=R7LW73_9FUSO
Zinc protease {ECO:0000313|EMBL:CDE92301.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
peptidase M16 domain-containing protein
js4906-23-3_S14_scaffold_454_14
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(16069..16461)
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7M0G8_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE93443.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
hypothetical protein
js4906-23-3_S14_scaffold_454_15
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(16493..16834)
DNA (342bp) protein (114aa)
TM2 transmembrane domain 2 protein Tax=Clostridium sp. CAG:813 RepID=R7MDU8_9CLOT
TM2 transmembrane domain 2 protein {ECO:0000313|EMBL:CDE98113.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
hypothetical protein
js4906-23-3_S14_scaffold_454_16
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(16934..17371)
DNA (438bp) protein (146aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase Tax=Clostridium sp. CAG:813 RepID=R7MED3_9CLOT
js4906-23-3_S14_scaffold_454_17
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

17525..18025
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7MIX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF00301.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-23-3_S14_scaffold_454_18
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

18056..20572
DNA (2517bp) protein (839aa)
Glycoside hydrolase Tax=Fusobacterium sp. CAG:815 RepID=R7LT32_9FUSO
Glycoside hydrolase {ECO:0000313|EMBL:CDE91994.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
glycoside hydrolase family protein
js4906-23-3_S14_scaffold_454_19
unknown

Not on your lists

comp(20634..20888)
DNA (255bp) protein (85aa)

This feature has no annotations

js4906-23-3_S14_scaffold_454_20
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists


comp(20968..23592)
DNA (2625bp) protein (875aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase Tax=Fusobacterium sp. CAG:815 RepID=R7M0W6_9FUSO
js4906-23-3_S14_scaffold_454_21
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(23699..24376)
DNA (678bp) protein (226aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7M9Q2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE97779.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-23-3_S14_scaffold_454_22
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(24389..25060)
DNA (672bp) protein (224aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LX51_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE92298.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_454_23
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(25079..26083)
DNA (1005bp) protein (335aa)
CoA-substrate-specific enzyme activase Tax=Fusobacterium sp. CAG:815 RepID=R7LY18_9FUSO
CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:CDE92297.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
CoA-substrate-specific enzyme activase
js4906-23-3_S14_scaffold_454_24
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(26173..26352)
DNA (180bp) protein (60aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7MCZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE97783.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-23-3_S14_scaffold_454_25
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

26634..27527
DNA (894bp) protein (298aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LUX3_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE92295.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
hypothetical protein
js4906-23-3_S14_scaffold_454_26
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

27529..27993
DNA (465bp) protein (155aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase Tax=Clostridium sp. CAG:813 RepID=R7MAY4_9CLOT
js4906-23-3_S14_scaffold_454_27
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

27997..28914
DNA (918bp) protein (306aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
RluA family pseudouridine synthase (EC:3.2.1.17)
Pseudouridine synthase Tax=Clostridium sp. CAG:813 RepID=R7MBQ2_9CLOT
js4906-23-3_S14_scaffold_454_28
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

28916..29362
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LY14_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE92292.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_454_29
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(29616..30314)
DNA (699bp) protein (233aa)
Putative type II secretion protein Tax=Fusobacterium sp. CAG:815 RepID=R7LWF1_9FUSO
Putative type II secretion protein {ECO:0000313|EMBL:CDE92830.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-23-3_S14_scaffold_454_30
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

30405..30623
DNA (219bp) protein (73aa)
MunI regulatory protein Tax=Fusobacterium sp. CAG:439 RepID=R7JBN5_9FUSO
MunI regulatory protein {ECO:0000313|EMBL:CDE61240.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
Yga2B
Displaying items 1-30 of 39 in total

View Taxonomy