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js4906-25-3_S22_scaffold_351

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-25-3_S22_scaffold_351_1
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(136..1707)
DNA (1572bp) protein (524aa)
Amino acid transporter Tax=Brachyspira sp. CAG:484 RepID=R5HJC1_9SPIR
Amino acid transporter {ECO:0000313|EMBL:CCY24811.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
amino acid permease
js4906-25-3_S22_scaffold_351_2
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(1697..3307)
DNA (1611bp) protein (537aa)
Amino acid transporter Tax=Acinetobacter sp. CAG:196 RepID=R5ST20_9GAMM
Amino acid transporter {ECO:0000313|EMBL:CCZ49911.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
amino acid permease
js4906-25-3_S22_scaffold_351_3
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(3343..4215)
DNA (873bp) protein (291aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit Tax=Bacteria RepID=R7HXW6_9CLOT
js4906-25-3_S22_scaffold_351_4
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

4358..4873
DNA (516bp) protein (172aa)
Phosphomevalonate kinase Tax=Clostridium sp. CAG:729 RepID=R7LLB8_9CLOT
Phosphomevalonate kinase {ECO:0000313|EMBL:CDE89549.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
js4906-25-3_S22_scaffold_351_5
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

4867..5910
DNA (1044bp) protein (348aa)
Uncharacterized protein Tax=Clostridium sp. CAG:768 RepID=R7I2B3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE45621.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
hypothetical protein
js4906-25-3_S22_scaffold_351_6
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

5904..6653
DNA (750bp) protein (250aa)
Glycosyl transferase, group 2 family protein (EC:2.4.1.-)
Putative glycosyltransferase Tax=Clostridium sp. CAG:967 RepID=R5KPC7_9CLOT
Putative glycosyltransferase {ECO:0000313|EMBL:CCY62817.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
js4906-25-3_S22_scaffold_351_7
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

6939..7223
DNA (285bp) protein (95aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00015172}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00015172};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7MBD9_9CLOT
hypothetical protein
js4906-25-3_S22_scaffold_351_8
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

7223..8797
DNA (1575bp) protein (525aa)
Peptidase M24 family Tax=Clostridium sp. CAG:729 RepID=R7LHQ9_9CLOT
Peptidase M24 family {ECO:0000313|EMBL:CDE88225.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
putative peptidase
js4906-25-3_S22_scaffold_351_9
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

8797..9552
DNA (756bp) protein (252aa)
Putative uncharacterized protein Tax=Dorea longicatena DSM 13814 RepID=A6BF12_9FIRM bin=MEL_C1 species=Dorea longicatena genus=Dorea taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=MEL_C1 organism_group=Melainabacteria
FIG011178: rRNA methylase {ECO:0000313|EMBL:CDE88226.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
tRNA/rRNA methyltransferase SpoU
js4906-25-3_S22_scaffold_351_10
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

9562..10965
DNA (1404bp) protein (468aa)
ace:Acel_0001 chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
chromosomal replication initiator protein DnaA
js4906-25-3_S22_scaffold_351_11
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(11033..11860)
DNA (828bp) protein (276aa)
Uncharacterized protein Tax=Clostridium sp. CAG:729 RepID=R7LNM5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE89293.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
hypothetical protein
js4906-25-3_S22_scaffold_351_12
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

12034..12678
DNA (645bp) protein (215aa)
Peptidase S1 and S6 chymotrypsin/Hap Tax=Brachyspira sp. CAG:484 RepID=R5H2Y3_9SPIR
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:CCY24020.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
putative peptidase
js4906-25-3_S22_scaffold_351_13
unknown

Not on your lists

comp(12769..13167)
DNA (399bp) protein (133aa)

This feature has no annotations

js4906-25-3_S22_scaffold_351_14
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(13284..14117)
DNA (834bp) protein (278aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide diphosphorylase (Carboxylating) Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MTY1_9FIRM bin=MEL_C1 species=Peptoniphilus sp. oral taxon 375 genus=Peptoniphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=MEL_C1 organism_group=Melainabacteria
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:CCY23525.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-25-3_S22_scaffold_351_15
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(14107..15711)
DNA (1605bp) protein (535aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase Tax=Brachyspira sp. CAG:484 RepID=R5HFP9_9SPIR
js4906-25-3_S22_scaffold_351_16
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15768..16568)
DNA (801bp) protein (267aa)
Histidinol phosphate phosphatase Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FYE5_CLOPA
Histidinol phosphate phosphatase {ECO:0000313|EMBL:ETD68447.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
HisJ family histidinol phosphate phosphatase
js4906-25-3_S22_scaffold_351_17
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(16681..18048)
DNA (1368bp) protein (456aa)
afl:Aflv_1507 glnA; glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
glnA1; glutamine synthetase (EC:6.3.1.2)
js4906-25-3_S22_scaffold_351_18

Not on your lists

18315..19433
DNA (1119bp) protein (373aa)
putative HDIG domain protein bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Uncharacterized protein {ECO:0000313|EMBL:EKE02344.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
metal dependent phosphohydrolase
js4906-25-3_S22_scaffold_351_19
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

19521..20246
DNA (726bp) protein (242aa)
ABC transporter ATP-binding protein Tax=Clostridium sp. CAG:729 RepID=R7LM89_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE89221.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
Fe(3+)-transporting ATPase
js4906-25-3_S22_scaffold_351_20
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

20246..21370
DNA (1125bp) protein (375aa)
Putative permease YjgP/YjgQ family Tax=Fusobacterium sp. CAG:439 RepID=R7JAV3_9FUSO
Putative permease YjgP/YjgQ family {ECO:0000313|EMBL:CDE60866.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
permease YjgP/YjgQ family protein
js4906-25-3_S22_scaffold_351_21
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

21382..22173
DNA (792bp) protein (264aa)
hypothetical protein bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CCZ50056.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
hypothetical protein
js4906-25-3_S22_scaffold_351_22
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(22383..23126)
DNA (744bp) protein (248aa)
acyl-ACP thioesterase (EC:3.1.2.14)
Acyl-ACP thioesterase Tax=Clostridium sp. CAG:729 RepID=R7LGY5_9CLOT
Acyl-ACP thioesterase {ECO:0000313|EMBL:CDE87900.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
js4906-25-3_S22_scaffold_351_23
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(23190..24017)
DNA (828bp) protein (276aa)
Endonuclease IV Tax=Fusobacterium sp. CAG:815 RepID=R7LUE9_9FUSO
Endonuclease IV {ECO:0000313|EMBL:CDE91681.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
hypothetical protein
js4906-25-3_S22_scaffold_351_24
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(24017..24961)
DNA (945bp) protein (315aa)
Methionyl-tRNA formyltransferase {ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|SAAS:SAAS00150580};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase Tax=Acinetobacter sp. CAG:196 RepID=R5S9H4_9GAMM
js4906-25-3_S22_scaffold_351_25
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(24948..25334)
DNA (387bp) protein (129aa)
integral membrane protein possibly involved in chromosome condensation; K06199 CrcB protein bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
crcB-like protein
js4906-25-3_S22_scaffold_351_26
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(25401..26672)
DNA (1272bp) protein (424aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase Tax=Fusobacterium sp. CAG:815 RepID=R7LX13_9FUSO
js4906-25-3_S22_scaffold_351_27
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

26849..27979
DNA (1131bp) protein (377aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5H7Y1_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25563.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-25-3_S22_scaffold_351_28
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(27976..28665)
DNA (690bp) protein (230aa)
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
tRNA (Guanine37-N(1)-) methyltransferase
js4906-25-3_S22_scaffold_351_29
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(28665..29180)
DNA (516bp) protein (172aa)
Ribosome maturation factor RimM Tax=Clostridium sp. CAG:813 RepID=R7MIW8_9CLOT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
rimM; 16S rRNA-processing protein RimM
js4906-25-3_S22_scaffold_351_30
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(29170..30159)
DNA (990bp) protein (330aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LT27_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE91989.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
pseudouridylate synthase
Displaying 30 items

View Taxonomy