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js4906-25-3_S22_scaffold_543

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-25-3_S22_scaffold_543_1
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

2..136
DNA (135bp) protein (45aa)
coiled-coil 31..52 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CDE89240.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
js4906-25-3_S22_scaffold_543_2
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(241..1083)
DNA (843bp) protein (281aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
Shikimate dehydrogenase Tax=Acinetobacter sp. CAG:196 RepID=R5SUN9_9GAMM
aroE; shikimate 5-dehydrogenase
js4906-25-3_S22_scaffold_543_3
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(1076..3373)
DNA (2298bp) protein (766aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
DNA topoisomerase 1 Tax=Brachyspira sp. CAG:484 RepID=R5H2S3_9SPIR
topA; DNA topoisomerase I
js4906-25-3_S22_scaffold_543_4
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(3379..4461)
DNA (1083bp) protein (361aa)
DNA protecting protein DprA Tax=Clostridium sp. CAG:729 RepID=R7LK16_9CLOT
DNA protecting protein DprA {ECO:0000313|EMBL:CDE88053.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
DNA protecting protein DprA
js4906-25-3_S22_scaffold_543_5
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(4467..5240)
DNA (774bp) protein (258aa)
Predicted protein Tax=Nematostella vectensis RepID=A7S2Q9_NEMVE bin=MEL_C2 species=Nematostella vectensis genus=Nematostella taxon_order=Actiniaria taxon_class=Anthozoa phylum=Cnidaria tax=MEL_C2 organism_group=Melainabacteria
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:CCZ51402.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
hypothetical protein
js4906-25-3_S22_scaffold_543_6
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(5242..6201)
DNA (960bp) protein (320aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5H244_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY23765.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-25-3_S22_scaffold_543_7
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(6186..6803)
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=Clostridium sp. CAG:715 RepID=R5DSC0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX79562.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-25-3_S22_scaffold_543_8
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

6957..7850
DNA (894bp) protein (298aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase Tax=Clostridium sp. CAG:768 RepID=R7HV48_9CLOT
js4906-25-3_S22_scaffold_543_9
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

7937..9238
DNA (1302bp) protein (434aa)
secD; protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
secD; protein-export membrane protein SecD
js4906-25-3_S22_scaffold_543_10
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

9249..10214
DNA (966bp) protein (322aa)
Protein-export membrane protein SecF Tax=Brachyspira sp. CAG:484 RepID=R5H240_9SPIR
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
protein translocase subunit secF
js4906-25-3_S22_scaffold_543_11
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

10321..11853
DNA (1533bp) protein (511aa)
Alpha-amylase putative Tax=Clostridium sp. CAG:967 RepID=R5KQB6_9CLOT
Alpha-amylase putative {ECO:0000313|EMBL:CCY63316.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
1,4-alpha-glucan branching enzyme
js4906-25-3_S22_scaffold_543_12
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists


11929..12120
DNA (192bp) protein (64aa)
50S ribosomal protein L28 Tax=Thermotoga RepID=RL28_THEMA bin=MEL_C1 species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=MEL_C1 organism_group=Melainabacteria
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
rpmB; 50S ribosomal protein L28
js4906-25-3_S22_scaffold_543_13
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(12276..13136)
DNA (861bp) protein (287aa)
Elongation factor Ts Tax=Acinetobacter sp. CAG:196 RepID=R5SGE3_9GAMM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
translation elongation factor Ts
js4906-25-3_S22_scaffold_543_14
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists


comp(13148..13912)
DNA (765bp) protein (255aa)
30S ribosomal protein S2 Tax=Clostridium sp. CAG:729 RepID=R7LL59_9CLOT
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
rpsB; 30S ribosomal protein S2
js4906-25-3_S22_scaffold_543_15
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(14087..14965)
DNA (879bp) protein (293aa)
Phospholipase C Tax=Brachyspira sp. CAG:484 RepID=R5HH58_9SPIR
Phospholipase C {ECO:0000313|EMBL:CCY24147.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-25-3_S22_scaffold_543_16
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

15096..17927
DNA (2832bp) protein (944aa)
UvrABC system protein A Tax=Brachyspira sp. CAG:484 RepID=R5H2M8_9SPIR
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
uvrA; excinuclease ABC subunit A
js4906-25-3_S22_scaffold_543_17

Not on your lists

18055..18867
DNA (813bp) protein (271aa)
putative enzyme (3.4.-); K06889 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Uncharacterized protein {ECO:0000313|EMBL:EKE02095.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
conserved protein of unknown function
js4906-25-3_S22_scaffold_543_18
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

18897..19904
DNA (1008bp) protein (336aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase Tax=Brachyspira sp. CAG:484 RepID=R5H919_9SPIR
Tryptophan--tRNA ligase {ECO:0000313|EMBL:CCY24569.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-25-3_S22_scaffold_543_19
unknown

Not on your lists

comp(20034..20216)
DNA (183bp) protein (61aa)

This feature has no annotations

js4906-25-3_S22_scaffold_543_20
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

20325..21026
DNA (702bp) protein (234aa)
Uncharacterized protein Tax=Clostridium sp. CAG:729 RepID=R7LJ21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE88081.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
js4906-25-3_S22_scaffold_543_21
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

21123..22127
DNA (1005bp) protein (335aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
gap_1; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.-)
Glyceraldehyde-3-phosphate dehydrogenase type I Tax=Clostridium sp. CAG:768 RepID=R7HZN3_9CLOT
js4906-25-3_S22_scaffold_543_22
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22222..23580)
DNA (1359bp) protein (453aa)
Putative uncharacterized protein Tax=Legionella drancourtii LLAP12 RepID=G9ELJ9_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31834.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
js4906-25-3_S22_scaffold_543_23
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(23655..25262)
DNA (1608bp) protein (536aa)
Uncharacterized protein Tax=Clostridium sp. CAG:729 RepID=R7LNL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE89273.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
js4906-25-3_S22_scaffold_543_24
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(26029..27681)
DNA (1653bp) protein (551aa)
DNA repair protein RecN Tax=Clostridium sp. CAG:768 RepID=R7HVR1_9CLOT
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
DNA repair protein RecN
js4906-25-3_S22_scaffold_543_25
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(27660..28496)
DNA (837bp) protein (279aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
Probable inorganic polyphosphate/ATP-NAD kinase Tax=Clostridium sp. CAG:967 RepID=R5KQ41_9CLOT
inorganic polyphosphate/ATP-NAD kinase
js4906-25-3_S22_scaffold_543_26
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(28595..29545)
DNA (951bp) protein (317aa)
Uncharacterized protein Tax=Clostridium sp. CAG:768 RepID=R7HYA4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE43953.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
js4906-25-3_S22_scaffold_543_27
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(29656..30291)
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7MGW8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE98997.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-25-3_S22_scaffold_543_28
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30294..31430)
DNA (1137bp) protein (379aa)
OmpA/MotB domain protein Tax=Clostridium sp. CAG:306 RepID=R6P0T8_9CLOT
OmpA/MotB domain protein {ECO:0000313|EMBL:CDC17988.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
OmpA/MotB domain-containing protein
js4906-25-3_S22_scaffold_543_29
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(31433..32203)
DNA (771bp) protein (257aa)
Transporter, MotA/TolQ/ExbB proton channel family Tax=Teredinibacter turnerae T7901 RepID=C5BSH9_TERTT bin=MEL_C2 species=Teredinibacter turnerae genus=Teredinibacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=MEL_C2 organism_group=Melainabacteria
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:CCZ51209.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
MotA/TolQ/ExbB proton channel
js4906-25-3_S22_scaffold_543_30
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(32288..33049)
DNA (762bp) protein (254aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
map; Methionine aminopeptidase 1 (EC:3.4.11.18)
Methionine aminopeptidase (Fragment) Tax=Ascaris suum RepID=F1LEW1_ASCSU bin=MEL_C2 species=Ascaris suum genus=Ascaris taxon_order=Ascaridida taxon_class=Chromadorea phylum=Nematoda tax=MEL_C2 organism_group=Melainabacteria
Displaying items 1-30 of 34 in total

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