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js4906-25-3_S22_scaffold_814

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-25-3_S22_scaffold_814_1
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

3..173
DNA (171bp) protein (57aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5HIS5_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24606.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-25-3_S22_scaffold_814_2
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(530..2068)
DNA (1539bp) protein (513aa)
Amino acid carrier protein Tax=Clostridium sp. CAG:729 RepID=R7LND1_9CLOT
Amino acid carrier protein {ECO:0000313|EMBL:CDE89636.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
alanine glycine permease
js4906-25-3_S22_scaffold_814_3
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(2164..3237)
DNA (1074bp) protein (358aa)
hypothetical protein bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
Glycosyltransferase group 1 family protein {ECO:0000313|EMBL:CCX79167.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
hypothetical protein
js4906-25-3_S22_scaffold_814_4
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(3589..4599)
DNA (1011bp) protein (337aa)
RNA polymerase sigma factor Tax=Brachyspira sp. CAG:484 RepID=R5H808_9SPIR
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
RNA polymerase sigma A factor
js4906-25-3_S22_scaffold_814_5
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(4635..5384)
DNA (750bp) protein (250aa)
rlmB; putative 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB (EC:2.1.1.-)
Conserved hypothetical tRNA/rRNA methyltransferase yacO Tax=Fusobacterium sp. CAG:439 RepID=R7JF67_9FUSO
Conserved hypothetical tRNA/rRNA methyltransferase yacO {ECO:0000313|EMBL:CDE62386.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
js4906-25-3_S22_scaffold_814_6
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(5384..6286)
DNA (903bp) protein (301aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
nadA; quinolinate synthase A (EC:2.5.1.72)
Quinolinate synthase A Tax=Brachyspira sp. CAG:484 RepID=R5HHP0_9SPIR
js4906-25-3_S22_scaffold_814_7
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

6382..8244
DNA (1863bp) protein (621aa)
Uncharacterized protein Tax=Clostridium sp. CAG:715 RepID=R5DSC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX79567.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-25-3_S22_scaffold_814_8
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

8263..8952
DNA (690bp) protein (230aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5H419_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24248.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-25-3_S22_scaffold_814_9
unknown

Not on your lists

comp(8775..9170)
DNA (396bp) protein (132aa)

This feature has no annotations

js4906-25-3_S22_scaffold_814_10
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

9302..10180
DNA (879bp) protein (293aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
DNA adenine modification methylase Tax=Clostridium sp. CAG:768 RepID=R7I255_9CLOT
DNA modification methylase
js4906-25-3_S22_scaffold_814_11
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(10330..11187)
DNA (858bp) protein (286aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
uppP; UDP-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase Tax=Clostridium sp. CAG:715 RepID=R5DU58_9CLOT
js4906-25-3_S22_scaffold_814_12
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(11187..11552)
DNA (366bp) protein (122aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
6-pyruvoyl-tetrahydropterin synthase (EC:4.2.3.12)
6-carboxy-5,6,7,8-tetrahydropterin synthase Tax=Fusobacterium sp. CAG:815 RepID=R7LX29_9FUSO
js4906-25-3_S22_scaffold_814_13
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(11565..12092)
DNA (528bp) protein (176aa)
putative lipopolysaccharide biosynthesis-related protein; K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (EC:2.7.1.- 2.7.7.-)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YrbI family {ECO:0000313|EMBL:CCZ49639.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
js4906-25-3_S22_scaffold_814_14
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(12095..13066)
DNA (972bp) protein (324aa)
arabinose-5-phosphate isomerase (EC:5.3.1.13)
KpsF/GutQ family protein Tax=Brachyspira sp. CAG:484 RepID=R5H9I1_9SPIR
KpsF/GutQ family protein {ECO:0000313|EMBL:CCY24764.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-25-3_S22_scaffold_814_15
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

13192..13479
DNA (288bp) protein (96aa)
Uncharacterized protein Tax=Acinetobacter sp. CAG:196 RepID=R5S7R0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CCZ49640.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
js4906-25-3_S22_scaffold_814_16
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

13560..14420
DNA (861bp) protein (287aa)
Radical SAM domain protein Tax=Clostridium sp. CAG:967 RepID=R5K919_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:CCY63233.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
js4906-25-3_S22_scaffold_814_17
GWA2_OP3X_41_15_curated, OP3X, Bacteria

Not on your lists

comp(14505..16091)
DNA (1587bp) protein (529aa)
Tax=GWA2_OP3X_41_15_curated
js4906-25-3_S22_scaffold_814_18
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

16312..18105
DNA (1794bp) protein (598aa)
ttm:Tthe_1369 DNA mismatch repair protein MutL; K03572 DNA mismatch repair protein MutL bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
mutL; DNA mismatch repair protein
Displaying 18 items

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