ggKbase home page

js4906-25-3_S22_scaffold_18_5

Organism: js4906-25-3_S22_Melainabacteria_curated_33_82

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(5566..6171)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-24 subunit Tax=Brachyspira sp. CAG:484 RepID=R5HB28_9SPIR similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 201.0
  • Bit_score: 248
  • Evalue 3.20e-63
RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:CCY25319.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 201.0
  • Bit_score: 248
  • Evalue 4.40e-63
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 198.0
  • Bit_score: 133
  • Evalue 4.20e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Brachyspira sp. CAG:484 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGAAACTTGGTAAACTGCACTACAAAAAAATGACTCTTGAAGAACTCGTAACTCTTGCACAACAAGAGGATTTTAAGGCGCTTGAAGAAATTGTGCGCAGAGAGCAAAAAAATATTTTTGCAACATTTACCTACCTACATTCCAATAACGAAAACATTTATGACTTAACTCAAGAGGCTTTGCTACGTATGGCAAAGGCTTTACCGACTTTAAAAAATCCGAAAACTTTCAAAAGTTGGTTAAATCAAATAGTCATGCACTTATTTTATGACGATTTACGCAAATTAAACCGTATTCCGCCAACAATTTCGATTGACGATGATAGAAAACAAGATAATAATTGCACAACAAATCCGCACACACTAATTCCAGACAAACGATGTAAACCTTTAGAGCATTGCCTTTCAAATGAATTAGATTGCGTAATAAAACGTGAAATGCGACAACTGCCTGATTATTTTCGTGTTCCGATTGTGTTAAGAGAGTTGCAAGGGCTATCTTATGATGAAATTGCAAAAATTACAAACACAAATGTCGGAACGGTTAAATCACGTATTGCAAGGGCAAGAAGCCGATTAAAAGACAGTCTAAAAGAGTATATTTAA
PROTEIN sequence
Length: 202
MKLGKLHYKKMTLEELVTLAQQEDFKALEEIVRREQKNIFATFTYLHSNNENIYDLTQEALLRMAKALPTLKNPKTFKSWLNQIVMHLFYDDLRKLNRIPPTISIDDDRKQDNNCTTNPHTLIPDKRCKPLEHCLSNELDCVIKREMRQLPDYFRVPIVLRELQGLSYDEIAKITNTNVGTVKSRIARARSRLKDSLKEYI*