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js4906-25-3_S22_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 113 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-25-3_S22_scaffold_18_1

Not on your lists

comp(383..2974)
DNA (2592bp) protein (864aa)
coiled-coil 342..363 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Uncharacterized protein {ECO:0000313|EMBL:EKE04610.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
js4906-25-3_S22_scaffold_18_2
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

3224..4018
DNA (795bp) protein (265aa)
RNA polymerase sigma factor Tax=Fusobacterium sp. CAG:439 RepID=R7J4N1_9FUSO
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
js4906-25-3_S22_scaffold_18_3
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

4021..5001
DNA (981bp) protein (327aa)
Type 4 prepilin peptidase Tax=Clostridium sp. CAG:768 RepID=R7HXI0_9CLOT
Type 4 prepilin peptidase {ECO:0000313|EMBL:CDE43663.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
type 4 prepilin peptidase
js4906-25-3_S22_scaffold_18_4
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(4998..5546)
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=Clostridium sp. CAG:729 RepID=R7LHT2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE88299.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
js4906-25-3_S22_scaffold_18_5
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(5566..6171)
DNA (606bp) protein (202aa)
RNA polymerase sigma-24 subunit Tax=Brachyspira sp. CAG:484 RepID=R5HB28_9SPIR
RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:CCY25319.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
RNA polymerase sigma factor RpoE
js4906-25-3_S22_scaffold_18_6
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists


comp(6258..7625)
DNA (1368bp) protein (456aa)
Signal recognition particle protein Tax=Fusobacterium sp. CAG:815 RepID=R7LYW8_9FUSO
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
signal recognition particle subunit FFH/SRP54 (srp54)
js4906-25-3_S22_scaffold_18_7
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

7740..9005
DNA (1266bp) protein (422aa)
seg 387..396 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CDE89000.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
SEC-C motif protein
js4906-25-3_S22_scaffold_18_8
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9130..9729
DNA (600bp) protein (200aa)
tag; DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
Uncharacterized protein Tax=Clostridium sp. CAG:356 RepID=R6YYV5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD36494.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
js4906-25-3_S22_scaffold_18_9
Clostridium sp. CAG:451, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9729..10211
DNA (483bp) protein (161aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:451.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase Tax=Clostridium sp. CAG:451 RepID=R7KFB2_9CLOT
aminoacyl-tRNA editing domain protein
js4906-25-3_S22_scaffold_18_10
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

10601..12595
DNA (1995bp) protein (665aa)
UvrABC system protein B Tax=Brachyspira sp. CAG:484 RepID=R5H980_9SPIR
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
uvrB; excinuclease ABC subunit B
js4906-25-3_S22_scaffold_18_11
unknown

Not on your lists

comp(12687..13049)
DNA (363bp) protein (121aa)

This feature has no annotations

js4906-25-3_S22_scaffold_18_12
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(13203..13697)
DNA (495bp) protein (165aa)
Uncharacterized protein Tax=Clostridium sp. CAG:967 RepID=R5K670_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY62270.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
js4906-25-3_S22_scaffold_18_13
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(13745..14518)
DNA (774bp) protein (258aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LW71_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE91993.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-25-3_S22_scaffold_18_14
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

14666..14968
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5HGE7_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY23801.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-25-3_S22_scaffold_18_15
unknown

Not on your lists

comp(15057..15758)
DNA (702bp) protein (234aa)

This feature has no annotations

js4906-25-3_S22_scaffold_18_16
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists


comp(15769..16803)
DNA (1035bp) protein (345aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit Tax=Clostridium sp. CAG:729 RepID=R7LHB8_9CLOT
js4906-25-3_S22_scaffold_18_17
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(16818..17444)
DNA (627bp) protein (209aa)
Metallo-beta-lactamase family protein Tax=Fusobacterium sp. CAG:439 RepID=R7J511_9FUSO
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:CDE59019.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
metallo-beta-lactamase family protein
js4906-25-3_S22_scaffold_18_18
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(17438..18271)
DNA (834bp) protein (278aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase Tax=Fusobacterium sp. CAG:815 RepID=R7LWD7_9FUSO
js4906-25-3_S22_scaffold_18_19
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18474..18983
DNA (510bp) protein (170aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Uncharacterized protein Tax=Clostridium sp. CAG:356 RepID=R7A159_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD36492.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
js4906-25-3_S22_scaffold_18_20
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

19226..19444
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=Clostridium sp. CAG:768 RepID=R7HWH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE43288.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
js4906-25-3_S22_scaffold_18_21
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

19524..19877
DNA (354bp) protein (118aa)
PF04237 family protein Tax=Clostridium sp. CAG:768 RepID=R7HTI2_9CLOT
PF04237 family protein {ECO:0000313|EMBL:CDE42561.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
hypothetical protein
js4906-25-3_S22_scaffold_18_22
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20788..21927
DNA (1140bp) protein (380aa)
Fic Tax=Azospirillum sp. CAG:260 RepID=R6I259_9PROT
Fic {ECO:0000313|EMBL:CDB40564.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
fic; Fic family protein
js4906-25-3_S22_scaffold_18_23
uncultured Termite group 1 bacterium, Elusimicrobia, Bacteria

Not on your lists

22192..25278
DNA (3087bp) protein (1029aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; species="Bacteria; Elusimicrobia; environmental samples.;" source="Uncultured termite group 1 bacterium phylotype Rs-D17.;"
CRISPR-associated protein Csn1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZM3_UNCTG
CRISPR-associated protein Csn1
js4906-25-3_S22_scaffold_18_24
RIFOXYD2_FULL_Sulfurimonas_37_8_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

25268..26167
DNA (900bp) protein (300aa)
CRISPR-associated endonuclease Cas1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I084_CLOCE
CRISPR-associated protein Cas1
Tax=RIFOXYD2_FULL_Sulfurimonas_37_8_curated
js4906-25-3_S22_scaffold_18_25
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26158..26490
DNA (333bp) protein (111aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
CRISPR-associated endoribonuclease Cas2 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TWI8_TISMK
CRISPR-associated protein Cas2
js4906-25-3_S22_scaffold_18_26
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

27710..28501
DNA (792bp) protein (264aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
5'-nucleotidase, exopolyphosphatase, 3'-nucleotidase (EC:3.1.3.6 3.1.3.5 3.6.1.11)
5'-nucleotidase SurE Tax=Clostridium sp. CAG:967 RepID=R5KBE0_9CLOT
js4906-25-3_S22_scaffold_18_27
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(28574..29836)
DNA (1263bp) protein (421aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
3-oxoacyl-ACP synthase (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Clostridium sp. CAG:813 RepID=R7MBV2_9CLOT
js4906-25-3_S22_scaffold_18_28
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(29935..30165)
DNA (231bp) protein (77aa)
Acyl carrier protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFG3_9BACT bin=MEL_A1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=MEL_A1 organism_group=Melainabacteria
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
acpP; acyl carrier protein ACP
js4906-25-3_S22_scaffold_18_29
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(30278..31003)
DNA (726bp) protein (242aa)
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier protein) reductase Tax=Brachyspira sp. CAG:484 RepID=R5H2I5_9SPIR
3-oxoacyl-(Acyl-carrier protein) reductase {ECO:0000313|EMBL:CCY23673.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-25-3_S22_scaffold_18_30
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(31007..31927)
DNA (921bp) protein (307aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
Malonyl CoA-acyl carrier protein transacylase Tax=Acinetobacter sp. CAG:196 RepID=R5SEF6_9GAMM
fabD; acyl-carrier-protein S-malonyltransferase
Displaying items 1-30 of 113 in total

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