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js4906-27-3_S30_scaffold_372

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-27-3_S30_scaffold_372_1
unknown

Not on your lists

668..1168
DNA (501bp) protein (167aa)

This feature has no annotations

js4906-27-3_S30_scaffold_372_2
Spathaspora passalidarum, Spathaspora, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

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1184..2320
DNA (1137bp) protein (379aa)
Putative uncharacterized protein Tax=Spathaspora passalidarum (strain NRRL Y-27907 / 11-Y1) RepID=G3AG86_SPAPN
Putative uncharacterized protein {ECO:0000313|EMBL:EGW35225.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Spathaspora.;" source="Spathaspora passalidarum (strain NRRL Y-27907 / 11-Y1).;"
hypothetical protein
js4906-27-3_S30_scaffold_372_3
Gallibacterium anatis, Gallibacterium, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2393..3670
DNA (1278bp) protein (426aa)
Uncharacterized protein Tax=Gallibacterium anatis 12656/12 RepID=U1H2L4_9PAST
Uncharacterized protein {ECO:0000313|EMBL:ERF78641.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Gallibacterium.;" source="Gallibacterium anatis 12656/12.;"
hypothetical protein
js4906-27-3_S30_scaffold_372_4
GWF2_Melainabacteria_37_15_curated, Melainabacteria, Bacteria

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comp(4231..5454)
DNA (1224bp) protein (408aa)
Uncharacterized protein bin=GWF2_Melainabacteria_37_15 species=Coxiella burnetii genus=Coxiella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
hypothetical protein
Tax=GWF2_Melainabacteria_37_15_curated
js4906-27-3_S30_scaffold_372_5
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5675..5821)
DNA (147bp) protein (49aa)
Uncharacterized protein Tax=Eubacterium sp. 14-2 RepID=S0J1R9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT26759.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
js4906-27-3_S30_scaffold_372_6
unknown

Not on your lists

comp(5831..6046)
DNA (216bp) protein (72aa)

This feature has no annotations

js4906-27-3_S30_scaffold_372_7
unknown

Not on your lists

comp(6290..6715)
DNA (426bp) protein (142aa)
Putative bacteriophage related protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LLL3_HALO1
bacteriophage-like protein
js4906-27-3_S30_scaffold_372_8
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6932..7924
DNA (993bp) protein (331aa)
Uncharacterized protein Tax=Nitrosospira sp. APG3 RepID=M5DH58_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KJJ95061.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 26.;"
hypothetical protein
js4906-27-3_S30_scaffold_372_9
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7987..9570
DNA (1584bp) protein (528aa)
Putative uncharacterized protein Tax=Bacteroides RepID=B6W558_9BACE
restriction endonuclease subunit M
Uncharacterized protein {ECO:0000313|EMBL:EFV67874.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
js4906-27-3_S30_scaffold_372_10
Porphyromonas crevioricanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9572..10168
DNA (597bp) protein (199aa)
Uncharacterized protein Tax=Porphyromonas gingivalis F0566 RepID=U2LHQ3_PORGN
Uncharacterized protein {ECO:0000313|EMBL:KGN90875.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas crevioricanis.;"
restriction endonuclease S subunit
js4906-27-3_S30_scaffold_372_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10248..10730
DNA (483bp) protein (161aa)
Uncharacterized protein Tax=Prevotella sp. CAG:279 RepID=R7HU55_9BACT
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EXZ95477.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
Restriction endonuclease S subunits
js4906-27-3_S30_scaffold_372_12
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10730..13957
DNA (3228bp) protein (1076aa)
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EDS03927.1}; EC=3.1.21.3 {ECO:0000313|EMBL:EDS03927.1};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Type I site-specific deoxyribonuclease, HsdR family Tax=Alistipes putredinis DSM 17216 RepID=B0MV45_9BACT
type I restriction enzyme, R subunit
js4906-27-3_S30_scaffold_372_13
Brachyspira murdochii, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

13973..15175
DNA (1203bp) protein (401aa)
Putative uncharacterized protein Tax=Brachyspira murdochii (strain ATCC 51284 / DSM 12563 / 56-150) RepID=D5UAV8_BRAM5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG71831.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira murdochii (strain ATCC 51284 / DSM 12563 / 56-150); (Serpulina murdochii).;"
js4906-27-3_S30_scaffold_372_14
Brachyspira murdochii, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

15172..15630
DNA (459bp) protein (153aa)
PilT protein domain protein Tax=Brachyspira murdochii (strain ATCC 51284 / DSM 12563 / 56-150) RepID=D5UAV7_BRAM5
twitching motility protein PilT
PilT protein domain protein {ECO:0000313|EMBL:ADG71830.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira murdochii (strain ATCC 51284 / DSM 12563 / 56-150); (Serpulina murdochii).;"
js4906-27-3_S30_scaffold_372_15

Not on your lists

16169..16438
DNA (270bp) protein (90aa)
Marine sediment metagenome DNA, contig: S01H1_S31030 {ECO:0000313|EMBL:GAG36744.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Bacteriophage related protein bin=GWF2_OP3_38_59 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
putative bacteriophage-like protein
js4906-27-3_S30_scaffold_372_16
unknown

Not on your lists

16435..16641
DNA (207bp) protein (69aa)

This feature has no annotations

js4906-27-3_S30_scaffold_372_17
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16631..17071
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=Azospirillum sp. CAG:239 RepID=R6J3S6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB53384.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
Putative bacteriophage-related protein
js4906-27-3_S30_scaffold_372_18
unknown

Not on your lists

comp(17055..17777)
DNA (723bp) protein (241aa)

This feature has no annotations

js4906-27-3_S30_scaffold_372_19
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17834..19447
DNA (1614bp) protein (538aa)
Putative resolvase Tax=Azospirillum sp. CAG:239 RepID=R6ISQ6_9PROT
Putative resolvase {ECO:0000313|EMBL:CDB53383.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
putative resolvase
js4906-27-3_S30_scaffold_372_20
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19868..20770
DNA (903bp) protein (301aa)
Fic Tax=Azospirillum sp. CAG:260 RepID=R6I259_9PROT
Fic {ECO:0000313|EMBL:CDB40564.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
fic; Fic family protein
js4906-27-3_S30_scaffold_372_trna_3
unknown

Not on your lists

comp(20989..21061)
DNA (73bp)
transferRNA Pro
js4906-27-3_S30_scaffold_372_trna_2
unknown

Not on your lists

comp(21080..21151)
DNA (72bp)
transferRNA Pro
js4906-27-3_S30_scaffold_372_21
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(21192..21530)
DNA (339bp) protein (113aa)
Putative transcriptional regulator Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KD46_ELUMP
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ACC98442.1}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
js4906-27-3_S30_scaffold_372_trna_1
unknown

Not on your lists

comp(21850..21921)
DNA (72bp)
transferRNA Arg
js4906-27-3_S30_scaffold_372_22
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22068..22469
DNA (402bp) protein (134aa)
Lipoprotein Tax=Parabacteroides sp. CAG:2 RepID=R6IMP5_9PORP
Lipoprotein {ECO:0000313|EMBL:CDB50535.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
lipoprotein
js4906-27-3_S30_scaffold_372_23
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

22817..23608
DNA (792bp) protein (264aa)
PilE-like protein Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KE65_ELUMP
PilE-like protein
PilE-like protein {ECO:0000313|EMBL:ACC98811.1}; Flags: Precursor;; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
js4906-27-3_S30_scaffold_372_24
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(23611..24750)
DNA (1140bp) protein (380aa)
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
N-acetylglucosamine-6-phosphate deacetylase Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F4D0_SPICH
js4906-27-3_S30_scaffold_372_25
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24751..25569)
DNA (819bp) protein (273aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6)
hypothetical protein Tax=Spirulina subsalsa RepID=UPI0002D2BD64
js4906-27-3_S30_scaffold_372_26
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(25582..27027)
DNA (1446bp) protein (482aa)
PTS system, N-acetylglucosamine-specific IIBC subunit Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KEF3_ELUMP
PTS system, N-acetylglucosamine-specific IIBC subunit
PTS system, N-acetylglucosamine-specific IIBC subunit {ECO:0000313|EMBL:ACC98899.1}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
js4906-27-3_S30_scaffold_372_27
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(27036..29528)
DNA (2493bp) protein (831aa)
PTS system, glucose subfamily, IIA subunit phosphocarrier Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KEF4_ELUMP
PTS system glucose subfamily transporter subunit IIA subunit
PTS system, glucose subfamily, IIA subunit phosphocarrier {ECO:0000313|EMBL:ACC98900.1}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
Displaying items 1-30 of 44 in total

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