ggKbase home page

js4906-27-3_S30_scaffold_524

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-27-3_S30_scaffold_524_1
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

2..649
DNA (648bp) protein (216aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
Glucose-1-phosphate thymidylyltransferase Tax=Clostridium sp. CAG:768 RepID=R7I1L7_9CLOT
glucose-1-phosphate thymidylyltransferase
js4906-27-3_S30_scaffold_524_2

Not on your lists

727..1035
DNA (309bp) protein (103aa)
Marine sediment metagenome DNA, contig: S01H1_S31030 {ECO:0000313|EMBL:GAG36744.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Bacteriophage related protein bin=GWF2_OP3_38_59 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
putative bacteriophage-like protein
js4906-27-3_S30_scaffold_524_3
unknown

Not on your lists

1032..1238
DNA (207bp) protein (69aa)

This feature has no annotations

js4906-27-3_S30_scaffold_524_4
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1228..1668
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=Azospirillum sp. CAG:239 RepID=R6J3S6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB53384.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
hypothetical protein
js4906-27-3_S30_scaffold_524_5
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1663..2100)
DNA (438bp) protein (146aa)
Uncharacterized protein Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U0N6_SULKY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR34353.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
js4906-27-3_S30_scaffold_524_6
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2154..3776
DNA (1623bp) protein (541aa)
Putative resolvase Tax=Azospirillum sp. CAG:239 RepID=R6ISQ6_9PROT
Putative resolvase {ECO:0000313|EMBL:CDB53383.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
putative resolvase
js4906-27-3_S30_scaffold_524_trna_2
unknown

Not on your lists

comp(3952..4024)
DNA (73bp)
transferRNA Val
js4906-27-3_S30_scaffold_524_7
unknown

Not on your lists

comp(4287..4742)
DNA (456bp) protein (152aa)

This feature has no annotations

js4906-27-3_S30_scaffold_524_8
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4818..4970)
DNA (153bp) protein (51aa)
Uncharacterized protein Tax=Azospirillum sp. CAG:260 RepID=R6I354_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB39851.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
js4906-27-3_S30_scaffold_524_9
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(5155..5640)
DNA (486bp) protein (162aa)
Thioesterase family protein Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KED8_ELUMP
thioesterase family protein
Thioesterase family protein {ECO:0000313|EMBL:ACC98884.1}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
js4906-27-3_S30_scaffold_524_10
Actinobacillus pleuropneumoniae, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5687..6313
DNA (627bp) protein (209aa)
hypothetical protein Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B7ADFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFN00883.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Actinobacillus pleuropneumoniae serovar 12 str. 1096.;"
js4906-27-3_S30_scaffold_524_11
unknown

Not on your lists

6314..6727
DNA (414bp) protein (138aa)

This feature has no annotations

js4906-27-3_S30_scaffold_524_12
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6848..7177
DNA (330bp) protein (110aa)
histidine biosynthesis protein HisIE Tax=Xanthomonas RepID=UPI00026319BB
histidine biosynthesis protein HisIE
Histidine biosynthesis protein HisIE {ECO:0000313|EMBL:AJC44531.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
js4906-27-3_S30_scaffold_524_13
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(7286..8104)
DNA (819bp) protein (273aa)
Uncharacterized protein Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KBS7_ELUMP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC97831.1}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
js4906-27-3_S30_scaffold_524_14
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(8112..9965)
DNA (1854bp) protein (618aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
1-deoxy-D-xylulose-5-phosphate synthase Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KBS6_ELUMP
deoxyxylulose-5-phosphate synthase
js4906-27-3_S30_scaffold_524_15
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(9974..10984)
DNA (1011bp) protein (337aa)
Geranylgeranyl pyrophosphate synthase Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KBS5_ELUMP
geranylgeranyl pyrophosphate synthase
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:ACC97829.1}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
js4906-27-3_S30_scaffold_524_16
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

11080..12252
DNA (1173bp) protein (391aa)
small GTP-binding protein bin=GWE2_Bacteroidetes_42_42 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
small GTP-binding protein
Tax=GWF2_Bacteroidetes_43_63_curated
js4906-27-3_S30_scaffold_524_17
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(12325..13302)
DNA (978bp) protein (326aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:ACC97912.1}; EC=4.1.2.13 {ECO:0000313|EMBL:ACC97912.1};; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
Fructose-1,6-bisphosphate aldolase, class II Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KB90_ELUMP
js4906-27-3_S30_scaffold_524_18
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

13501..14541
DNA (1041bp) protein (347aa)
Peptidase M42 family protein Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KB91_ELUMP
peptidase M42 family protein
Peptidase M42 family protein {ECO:0000313|EMBL:ACC97913.1}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
js4906-27-3_S30_scaffold_524_19
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

14557..16905
DNA (2349bp) protein (783aa)
Transketolase central region Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KB92_ELUMP
transketolase central region
Transketolase central region {ECO:0000313|EMBL:ACC97914.1}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
js4906-27-3_S30_scaffold_524_20
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

16926..17354
DNA (429bp) protein (143aa)
Putative DNA-binding protein with PD1-like DNA-binding motif Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KB93_ELUMP
putative DNA-binding protein
Putative DNA-binding protein with PD1-like DNA-binding motif {ECO:0000313|EMBL:ACC97915.1}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
js4906-27-3_S30_scaffold_524_21
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

17636..18856
DNA (1221bp) protein (407aa)
Uncharacterized protein Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KD87_ELUMP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC98483.1}; Flags: Precursor;; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
js4906-27-3_S30_scaffold_524_22
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(19825..21207)
DNA (1383bp) protein (461aa)
Biotin and thiamin synthesis associated Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KED7_ELUMP
thiH; thiamine biosynthesis protein ThiH
Biotin and thiamin synthesis associated {ECO:0000313|EMBL:ACC98883.1}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
js4906-27-3_S30_scaffold_524_23
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

21292..21744
DNA (453bp) protein (151aa)
SsrA-binding protein Tax=Elusimicrobium minutum (strain Pei191) RepID=SSRP_ELUMP
SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
js4906-27-3_S30_scaffold_524_trna_1
unknown

Not on your lists

21814..21897
DNA (84bp)
transferRNA Leu
js4906-27-3_S30_scaffold_524_24
unknown

Not on your lists

21921..22739
DNA (819bp) protein (273aa)
js4906-27-3_S30_scaffold_524_25
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

22782..24032
DNA (1251bp) protein (417aa)
Cell division protein ftsA Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KCH5_ELUMP
cell division protein FtsA
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
js4906-27-3_S30_scaffold_524_26
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

24045..25196
DNA (1152bp) protein (384aa)
Cell division protein FtsZ Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KCH6_ELUMP
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
js4906-27-3_S30_scaffold_524_27
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

25211..26302
DNA (1092bp) protein (364aa)
Putative type II secretion system protein Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KCH7_ELUMP
putative type II secretion system protein
Putative type II secretion system protein {ECO:0000313|EMBL:ACC98098.1}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
js4906-27-3_S30_scaffold_524_28
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

26304..26984
DNA (681bp) protein (227aa)
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
Cytidylate kinase Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KCH8_ELUMP
Displaying items 1-30 of 37 in total

View Taxonomy