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js4906-27-3_S30_scaffold_2045

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-27-3_S30_scaffold_2045_1
Reinekea blandensis, Reinekea, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..452)
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Reinekea blandensis MED297 RepID=A4BKU6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR07252.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Reinekea.;" source="Reinekea blandensis MED297.;"
histone family protein DNA-binding protein
js4906-27-3_S30_scaffold_2045_2
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

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comp(430..1806)
DNA (1377bp) protein (459aa)
Transcription termination factor Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KC94_ELUMP
transcription termination factor
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
js4906-27-3_S30_scaffold_2045_3
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

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comp(1849..2307)
DNA (459bp) protein (153aa)
Ribosome maturation factor RimP Tax=Elusimicrobium minutum (strain Pei191) RepID=RIMP_ELUMP
hypothetical protein
Ribosome maturation factor RimP {ECO:0000255|HAMAP-Rule:MF_01077}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
js4906-27-3_S30_scaffold_2045_4
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2446..2937
DNA (492bp) protein (164aa)
Uncharacterized protein Tax=Eubacterium dolichum CAG:375 RepID=R7G8P0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE23525.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
acetyltransferase
js4906-27-3_S30_scaffold_2045_5
unknown

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3082..3954
DNA (873bp) protein (291aa)
js4906-27-3_S30_scaffold_2045_6
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

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comp(4039..5760)
DNA (1722bp) protein (574aa)
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_01569}; EC=6.1.1.15 {ECO:0000255|HAMAP-Rule:MF_01569};; Prolyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_01569}; Short=ProRS {ECO:0000255|HAMAP-Rule:MF_01569};; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
Proline--tRNA ligase Tax=Elusimicrobium minutum (strain Pei191) RepID=SYP_ELUMP
js4906-27-3_S30_scaffold_2045_7
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

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comp(5787..6830)
DNA (1044bp) protein (348aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KCJ6_ELUMP
js4906-27-3_S30_scaffold_2045_8
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

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comp(6856..7977)
DNA (1122bp) protein (374aa)
Putative membrane-associated zinc metalloprotease Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KCJ8_ELUMP
putative membrane-associated zinc metalloprotease
Putative membrane-associated zinc metalloprotease {ECO:0000313|EMBL:ACC98244.1}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
js4906-27-3_S30_scaffold_2045_9
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

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comp(7986..9185)
DNA (1200bp) protein (400aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00183}; Short=DXP reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000255|HAMAP-Rule:MF_00183};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00183}; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=Elusimicrobium minutum (strain Pei191) RepID=DXR_ELUMP
js4906-27-3_S30_scaffold_2045_10
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(9182..10003)
DNA (822bp) protein (274aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
Phosphatidate cytidylyltransferase Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KCK0_ELUMP
phosphatidate cytidylyltransferase
js4906-27-3_S30_scaffold_2045_11
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(10056..10772)
DNA (717bp) protein (239aa)
hypothetical protein bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI60896.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
js4906-27-3_S30_scaffold_2045_12
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(10769..11383)
DNA (615bp) protein (205aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
Isoprenyl transferase Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KCL4_ELUMP
Displaying 12 items

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