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js4906-27-3_S30_scaffold_1008

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-27-3_S30_scaffold_1008_1
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

163..1320
DNA (1158bp) protein (386aa)
S-layer protein bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
S-layer domain protein {ECO:0000313|EMBL:CCX79355.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
S-layer protein
js4906-27-3_S30_scaffold_1008_2
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(1351..1782)
DNA (432bp) protein (144aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
Zinc-binding CMP/dCMP deaminase Tax=Clostridium sp. CAG:715 RepID=R5DIJ7_9CLOT
zinc-binding CMP/dCMP deaminase
js4906-27-3_S30_scaffold_1008_3
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(1775..3436)
DNA (1662bp) protein (554aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
sensor signal transduction histidine kinase (EC:2.7.13.3)
GAF sensor signal transduction histidine kinase Tax=Clostridium sp. CAG:967 RepID=R5KNM7_9CLOT
js4906-27-3_S30_scaffold_1008_4
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

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comp(3440..4153)
DNA (714bp) protein (238aa)
Two component transcriptional regulator winged helix family Tax=Fusobacterium sp. CAG:439 RepID=R7J6L0_9FUSO
Two component transcriptional regulator winged helix family {ECO:0000313|EMBL:CDE59574.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
winged helix family two component transcriptional regulator
js4906-27-3_S30_scaffold_1008_5
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(4154..4879)
DNA (726bp) protein (242aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5HK50_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25202.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
membrane protein
js4906-27-3_S30_scaffold_1008_6
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

4952..5635
DNA (684bp) protein (228aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5H3I3_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24280.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
3-Deoxy-D-manno-octulosonic-acid transferase
js4906-27-3_S30_scaffold_1008_7
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

5577..6974
DNA (1398bp) protein (466aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (EC:3.4.16.4)
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase Tax=Clostridium sp. CAG:715 RepID=R5DRJ7_9CLOT
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase {ECO:0000313|EMBL:CCX79327.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-27-3_S30_scaffold_1008_8
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(6971..8164)
DNA (1194bp) protein (398aa)
Predicted esterase of the alpha-beta hydrolase superfamily Tax=Solibacillus silvestris StLB046 RepID=F2F8Q6_SOLSS bin=MEL_A1 species=Solibacillus silvestris genus=Solibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=MEL_A1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CCX79084.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
putative esterase of the alpha-beta hydrolase superfamily
js4906-27-3_S30_scaffold_1008_9
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(8172..9695)
DNA (1524bp) protein (508aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5H528_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24608.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
hypothetical protein
js4906-27-3_S30_scaffold_1008_10
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists


comp(9699..11411)
DNA (1713bp) protein (571aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
Arginine--tRNA ligase Tax=Acinetobacter sp. CAG:196 RepID=R5ST24_9GAMM
arginyl-tRNA synthetase
js4906-27-3_S30_scaffold_1008_11
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(11480..13282)
DNA (1803bp) protein (601aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
mar:MAE_39840 GTP-binding protein LepA; K03596 GTP-binding protein LepA bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
LepA; GTP-binding protein LepA
js4906-27-3_S30_scaffold_1008_12
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(13314..14948)
DNA (1635bp) protein (545aa)
DNA repair protein RecN Tax=Brachyspira sp. CAG:484 RepID=R5H649_9SPIR
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
DNA repair protein RecN
js4906-27-3_S30_scaffold_1008_13
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(14942..15745)
DNA (804bp) protein (268aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase Tax=Fusobacterium sp. CAG:815 RepID=R7LSG7_9FUSO
js4906-27-3_S30_scaffold_1008_14

Not on your lists

16384..16707
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7MK48_9CLOT
Marine sediment metagenome DNA, contig: S01H4_S05900 {ECO:0000313|EMBL:GAG95285.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
js4906-27-3_S30_scaffold_1008_15
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16710..17942
DNA (1233bp) protein (411aa)
HipA-like protein Tax=Acidiphilium sp. PM RepID=F7SBK5_9PROT
HipA-like protein {ECO:0000313|EMBL:EGO93452.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
HipA-like protein
js4906-27-3_S30_scaffold_1008_16
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(18100..18294)
DNA (195bp) protein (65aa)
hypothetical protein bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CDE93410.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-27-3_S30_scaffold_1008_17
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

Not on your lists

comp(18352..18888)
DNA (537bp) protein (179aa)
Putative uncharacterized protein Tax=Lentisphaera araneosa HTCC2155 RepID=A6DN65_9BACT bin=MEL_A1 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=MEL_A1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:EDM26813.1}; species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;"
hypothetical protein
js4906-27-3_S30_scaffold_1008_18
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(19521..20345)
DNA (825bp) protein (275aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5HKW7_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25321.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
Displaying 18 items

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