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js4906-27-3_S30_scaffold_1751

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-27-3_S30_scaffold_1751_1
GWF2_Melainabacteria_32_7_curated, Melainabacteria, Bacteria

Not on your lists

346..4467
DNA (4122bp) protein (1374aa)
coiled-coil 606..627 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Tax=GWF2_Melainabacteria_32_7_curated
js4906-27-3_S30_scaffold_1751_2
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(4472..4795)
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Clostridium sp. CAG:729 RepID=R7LP62_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE89142.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
js4906-27-3_S30_scaffold_1751_3
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(4795..5451)
DNA (657bp) protein (219aa)
Putative amidophosphoribosyltransferase Tax=Clostridium sp. CAG:967 RepID=R5KQ27_9CLOT
Putative amidophosphoribosyltransferase {ECO:0000313|EMBL:CCY63231.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
amidophosphoribosyltransferase
js4906-27-3_S30_scaffold_1751_4
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

5505..6857
DNA (1353bp) protein (451aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
Peptidase M50 Tax=Brachyspira sp. CAG:484 RepID=R5H5W4_9SPIR
peptidase
js4906-27-3_S30_scaffold_1751_5
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

7122..7448
DNA (327bp) protein (109aa)
hypothetical protein bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CCY25245.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-27-3_S30_scaffold_1751_6
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(7449..8261)
DNA (813bp) protein (271aa)
Sugar ABC transporter permease protein Tax=Brachyspira sp. CAG:484 RepID=R5HBS8_9SPIR
Sugar ABC transporter permease protein {ECO:0000313|EMBL:CCY25529.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
sugar ABC transporter permease
js4906-27-3_S30_scaffold_1751_7
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

8416..10311
DNA (1896bp) protein (632aa)
Surface antigen (D15) Tax=Clostridium sp. CAG:768 RepID=R7HUW4_9CLOT
Surface antigen (D15) {ECO:0000313|EMBL:CDE43041.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
OMP85 family membrane protein
js4906-27-3_S30_scaffold_1751_8
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

10331..10786
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Clostridium sp. CAG:715 RepID=R5DGM0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX79385.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-27-3_S30_scaffold_1751_9
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

10799..12259
DNA (1461bp) protein (487aa)
Flagellar biosynthesis protein FlhA Tax=Brachyspira sp. CAG:484 RepID=R5H3C7_9SPIR
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:CCY24215.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
flagellar biosynthesis protein FlhA
js4906-27-3_S30_scaffold_1751_10
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

12269..13228
DNA (960bp) protein (320aa)
Alcohol dehydrogenase GroES domain protein Tax=Clostridium sp. CAG:729 RepID=R7LMC0_9CLOT
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:CDE88833.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
Alcohol dehydrogenase GroES domain protein
js4906-27-3_S30_scaffold_1751_11
unknown

Not on your lists

comp(13238..13681)
DNA (444bp) protein (148aa)

This feature has no annotations

js4906-27-3_S30_scaffold_1751_12
unknown

Not on your lists

13853..14197
DNA (345bp) protein (115aa)

This feature has no annotations

js4906-27-3_S30_scaffold_1751_13
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(14363..15067)
DNA (705bp) protein (235aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
FAD-dependent thymidylate synthase (EC:2.1.1.148)
Thymidylate synthase ThyX Tax=Clostridium sp. CAG:768 RepID=R7HXI3_9CLOT
js4906-27-3_S30_scaffold_1751_14
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(15071..15346)
DNA (276bp) protein (92aa)
hypothetical protein bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
HicB family protein {ECO:0000313|EMBL:CCX80496.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
Toxin-antitoxin system component HicB, antitoxin
js4906-27-3_S30_scaffold_1751_15
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(15358..15942)
DNA (585bp) protein (195aa)
Uncharacterized protein Tax=Clostridium sp. CAG:768 RepID=R7I2Z3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE45633.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
Spore germination protein-like protein
js4906-27-3_S30_scaffold_1751_16
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(15955..16797)
DNA (843bp) protein (281aa)
Uncharacterized protein Tax=Clostridium sp. CAG:967 RepID=R5KPB8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY62807.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
js4906-27-3_S30_scaffold_1751_17
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(16797..17645)
DNA (849bp) protein (283aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
tRNA pseudouridine synthase B Tax=Brachyspira sp. CAG:484 RepID=R5H7X8_9SPIR
tRNA pseudouridine synthase B
js4906-27-3_S30_scaffold_1751_18
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17645..17995)
DNA (351bp) protein (117aa)
Ribosome-binding factor A Tax=Clostridium sp. CAG:306 RepID=R6QA48_9CLOT
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
ribosome-binding factor A
js4906-27-3_S30_scaffold_1751_19
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(18008..20431)
DNA (2424bp) protein (808aa)
Translation initiation factor IF-2 Tax=Clostridium sp. CAG:768 RepID=R7I2Y5_9CLOT
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
translation initiation factor IF-2
js4906-27-3_S30_scaffold_1751_20
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(20466..20729)
DNA (264bp) protein (88aa)
hypothetical protein; K07742 hypothetical protein bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CCZ51349.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
putative nucleic-acid-binding protein implicated in transcription termination
js4906-27-3_S30_scaffold_1751_21

Not on your lists

20930..21403
DNA (474bp) protein (158aa)
Virulence protein Tax=uncultured bacterium URE12 RepID=C0JZS3_9BACT
Virulence protein {ECO:0000313|EMBL:ACM90953.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium URE12.;"
filamentation induced by cAMP protein fic
Displaying 21 items

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