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js4906-27-3_S30_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 178 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-27-3_S30_scaffold_9_1
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

195..542
DNA (348bp) protein (116aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
Aspartate 1-decarboxylase Tax=Fusobacterium sp. CAG:815 RepID=R7LY86_9FUSO
aspartate alpha-decarboxylase
js4906-27-3_S30_scaffold_9_2
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

561..4058
DNA (3498bp) protein (1166aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III alpha subunit Tax=Brachyspira sp. CAG:484 RepID=R5H454_9SPIR
js4906-27-3_S30_scaffold_9_3
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

4095..6059
DNA (1965bp) protein (655aa)
Similar to Q4C4Y2_CROWT SLT:SLT Tax=Clostridium sp. CAG:715 RepID=R5DHK0_9CLOT
Similar to Q4C4Y2_CROWT SLT:SLT {ECO:0000313|EMBL:CCX79663.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
soluble lytic murein transglycosylase
js4906-27-3_S30_scaffold_9_4
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

6107..6694
DNA (588bp) protein (196aa)
Type IV pilus assembly protein PilZ Tax=Brachyspira sp. CAG:484 RepID=R5H945_9SPIR
Type IV pilus assembly protein PilZ {ECO:0000313|EMBL:CCY24604.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-27-3_S30_scaffold_9_5
GWF2_Melainabacteria_32_7_curated, Melainabacteria, Bacteria

Not on your lists

6699..7703
DNA (1005bp) protein (335aa)
response regulator receiver modulated metal dependent phosphohydrolase bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
sensor cyclic diguanylate phosphodiesterase, GAF and GAF domain-containing
Tax=GWF2_Melainabacteria_32_7_curated
js4906-27-3_S30_scaffold_9_6
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

7700..8734
DNA (1035bp) protein (345aa)
Arginine/lysine/ornithine decarboxylases (EC:4.1.1.18)
Orn/Lys/Arg decarboxylase major region Tax=Clostridium sp. CAG:715 RepID=R5DXN7_9CLOT
Orn/Lys/Arg decarboxylase major region {ECO:0000313|EMBL:CCX80746.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-27-3_S30_scaffold_9_7
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

8798..9526
DNA (729bp) protein (243aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:439 RepID=R7JB90_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE60868.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
hypothetical protein
js4906-27-3_S30_scaffold_9_8
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9533..11224
DNA (1692bp) protein (564aa)
Uncharacterized protein Tax=Clostridium sp. CAG:306 RepID=R6PHV9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC20424.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
hypothetical protein
js4906-27-3_S30_scaffold_9_9
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

11393..11665
DNA (273bp) protein (91aa)
Histone family protein DNA-binding protein Tax=Brachyspira sp. CAG:484 RepID=R5H567_9SPIR
Histone family protein DNA-binding protein {ECO:0000313|EMBL:CCY24845.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
DNA-binding protein HBsu
js4906-27-3_S30_scaffold_9_10
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(11734..12594)
DNA (861bp) protein (287aa)
Universal stress protein Tax=Methanosarcina mazei Go1 RepID=Q8PWX4_METMA bin=MEL_A1 species=Methanosarcina mazei genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=MEL_A1 organism_group=Melainabacteria
Universal stress protein UspA-like protein {ECO:0000313|EMBL:CCX79464.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
Universal stress protein UspA and related nucleotide-binding proteins
js4906-27-3_S30_scaffold_9_11
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12709..13302
DNA (594bp) protein (198aa)
RNA polymerase sigma factor Tax=Clostridium sp. CAG:306 RepID=R6PAQ6_9CLOT
RNA polymerase sigma factor {ECO:0000313|EMBL:CDC21393.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
RNA polymerase sigma-28 subunit FliA/WhiG
js4906-27-3_S30_scaffold_9_12
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

13421..14572
DNA (1152bp) protein (384aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:439 RepID=R7JE53_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE61888.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
hypothetical protein
js4906-27-3_S30_scaffold_9_13
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

14569..15444
DNA (876bp) protein (292aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5HI26_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24371.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-27-3_S30_scaffold_9_14
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

15542..16231
DNA (690bp) protein (230aa)
hypothetical protein; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
tRNA delta(2)-isopentenylpyrophosphate transferase
js4906-27-3_S30_scaffold_9_15
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

Not on your lists

16310..17731
DNA (1422bp) protein (474aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DDI2_9BACT
amino acid permease
Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
js4906-27-3_S30_scaffold_9_16
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(17801..18439)
DNA (639bp) protein (213aa)
Uncharacterized protein Tax=Clostridium sp. CAG:715 RepID=R5DPY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX80864.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-27-3_S30_scaffold_9_17
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(18613..19314)
DNA (702bp) protein (234aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7M039_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE93097.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-27-3_S30_scaffold_9_18
unknown

Not on your lists

19443..19604
DNA (162bp) protein (54aa)

This feature has no annotations

js4906-27-3_S30_scaffold_9_19
unknown

Not on your lists

19670..19933
DNA (264bp) protein (88aa)

This feature has no annotations

js4906-27-3_S30_scaffold_9_20
unknown

Not on your lists

comp(19930..20277)
DNA (348bp) protein (116aa)

This feature has no annotations

js4906-27-3_S30_scaffold_9_21
unknown

Not on your lists

comp(20366..20581)
DNA (216bp) protein (72aa)

This feature has no annotations

js4906-27-3_S30_scaffold_9_22
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

20703..21947
DNA (1245bp) protein (415aa)
Peptidase U32 Tax=Clostridium sp. CAG:813 RepID=R7MIC5_9CLOT
Peptidase U32 {ECO:0000313|EMBL:CDF00365.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
peptidase U32
js4906-27-3_S30_scaffold_9_23
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(21949..22986)
DNA (1038bp) protein (346aa)
Glycosyl transferase family 4 Tax=Clostridium sp. CAG:768 RepID=R7HXH7_9CLOT
Glycosyl transferase family 4 {ECO:0000313|EMBL:CDE44394.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
glycosyl transferase family protein
js4906-27-3_S30_scaffold_9_24
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(22999..24234)
DNA (1236bp) protein (412aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase Tax=Brachyspira sp. CAG:484 RepID=R5H1S2_9SPIR
js4906-27-3_S30_scaffold_9_25
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(24319..24840)
DNA (522bp) protein (174aa)
Uncharacterized protein Tax=Acinetobacter sp. CAG:196 RepID=R5SBN2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CCZ50448.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
js4906-27-3_S30_scaffold_9_26
unknown

Not on your lists

25017..26099
DNA (1083bp) protein (361aa)

This feature has no annotations

js4906-27-3_S30_scaffold_9_27
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

26185..27366
DNA (1182bp) protein (394aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5HI52_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24396.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-27-3_S30_scaffold_9_28
unknown

Not on your lists

27324..28508
DNA (1185bp) protein (395aa)

This feature has no annotations

js4906-27-3_S30_scaffold_9_29
unknown

Not on your lists

28518..28670
DNA (153bp) protein (51aa)

This feature has no annotations

js4906-27-3_S30_scaffold_9_30
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

28673..29455
DNA (783bp) protein (261aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
ADP-dependent (S)-NAD(P)H-hydrate dehydratase Tax=Clostridium sp. CAG:768 RepID=R7HWB7_9CLOT
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
Displaying items 1-30 of 178 in total

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