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js4906-27-3_S30_scaffold_40

Search features with annotation key words

Displaying items 1-30 of 154 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-27-3_S30_scaffold_40_1
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(3..728)
DNA (726bp) protein (242aa)
Protein translocase subunit SecA Tax=Fusobacterium sp. CAG:439 RepID=R7J960_9FUSO
Protein translocase subunit SecA {ECO:0000313|EMBL:CDE60474.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
js4906-27-3_S30_scaffold_40_2

Not on your lists

921..2714
DNA (1794bp) protein (598aa)
Aminopeptidase PepS Tax=Gemella haemolysans ATCC 10379 RepID=C5NW92_9BACL bin=ACD20 species=Gemella haemolysans genus=Gemella taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Aminopeptidase PepS {ECO:0000313|EMBL:EKE02985.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
aminopeptidase
js4906-27-3_S30_scaffold_40_3
GWF2_Melainabacteria_37_15_curated, Melainabacteria, Bacteria

Not on your lists

comp(2802..3848)
DNA (1047bp) protein (349aa)
id=4186676 bin=GWF2_Melainabacteria_37_15 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
Tax=GWF2_Melainabacteria_37_15_curated
js4906-27-3_S30_scaffold_40_4
unknown

Not on your lists

3991..4323
DNA (333bp) protein (111aa)

This feature has no annotations

js4906-27-3_S30_scaffold_40_5
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(4598..5167)
DNA (570bp) protein (190aa)
hypothetical protein bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CCY63748.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
hypothetical protein
js4906-27-3_S30_scaffold_40_6
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(5170..5805)
DNA (636bp) protein (212aa)
Iron-sulfur flavoprotein Tax=Methanosarcina thermophila RepID=ISF_METTE bin=MEL_C1 species=Methanosarcina thermophila genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=MEL_C1 organism_group=Melainabacteria
NADPH-dependent FMN reductase {ECO:0000313|EMBL:CDE97888.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
NADPH-dependent FMN reductase
js4906-27-3_S30_scaffold_40_7
unknown

Not on your lists

5955..7049
DNA (1095bp) protein (365aa)

This feature has no annotations

js4906-27-3_S30_scaffold_40_8
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

7083..8741
DNA (1659bp) protein (553aa)
chloride channel protein, CIC family; K03281 chloride channel protein, CIC family bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
Cl-channel voltage-gated family protein {ECO:0000313|EMBL:CCX80667.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
chloride channel protein
js4906-27-3_S30_scaffold_40_9
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

8886..11504
DNA (2619bp) protein (873aa)
Aldehyde-alcohol dehydrogenase Tax=Clostridium sp. CAG:768 RepID=R7I100_9CLOT
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
aldehyde-alcohol dehydrogenase
js4906-27-3_S30_scaffold_40_10
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11516..12145
DNA (630bp) protein (210aa)
Redox-sensing transcriptional repressor Rex Tax=Clostridium sp. CAG:306 RepID=R6PKU8_9CLOT
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
redox-sensing transcriptional repressor Rex
js4906-27-3_S30_scaffold_40_11
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

12135..12371
DNA (237bp) protein (79aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5HG68_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY23822.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
thioredoxin-like [2Fe-2S] ferredoxin
js4906-27-3_S30_scaffold_40_12
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

12364..14085
DNA (1722bp) protein (574aa)
Putative PAS/PAC sensor protein Tax=Clostridium sp. CAG:729 RepID=R7LMG0_9CLOT
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:CDE88883.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
iron-sulfur cluster-binding sensor, FehydlgC, FeS and PAS domain-containing
js4906-27-3_S30_scaffold_40_13
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

14085..15242
DNA (1158bp) protein (386aa)
Stage II sporulation protein E (SpoIIE) Tax=Brachyspira sp. CAG:484 RepID=R5H2A0_9SPIR
Stage II sporulation protein E (SpoIIE) {ECO:0000313|EMBL:CCY23820.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
Stage II sporulation protein E
js4906-27-3_S30_scaffold_40_14
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

15253..15516
DNA (264bp) protein (88aa)
Hydrogenase large subunit Tax=Clostridium sp. CAG:729 RepID=R7LJR5_9CLOT
Hydrogenase large subunit {ECO:0000313|EMBL:CDE88885.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
hypothetical protein
js4906-27-3_S30_scaffold_40_15
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

15509..16957
DNA (1449bp) protein (483aa)
Uncharacterized protein Tax=Clostridium sp. CAG:729 RepID=R7LLC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE88886.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
Fe-hydrogenase large subunit
js4906-27-3_S30_scaffold_40_16
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

16961..18148
DNA (1188bp) protein (396aa)
Iron-containing alcohol dehydrogenase Tax=Acinetobacter sp. CAG:196 RepID=R5SJW4_9GAMM
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:CCZ51169.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
iron-containing alcohol dehydrogenase
js4906-27-3_S30_scaffold_40_17
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(18206..19990)
DNA (1785bp) protein (595aa)
afl:Aflv_1218 cation transport ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:CCZ51567.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
heavy metal translocating P-type ATPase
js4906-27-3_S30_scaffold_40_18
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20123..20461
DNA (339bp) protein (113aa)
Transcriptional regulator ArsR family Tax=Clostridium sp. CAG:306 RepID=R6P7H7_9CLOT
Transcriptional regulator ArsR family {ECO:0000313|EMBL:CDC20323.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
transcriptional regulator
js4906-27-3_S30_scaffold_40_19
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

21333..23423
DNA (2091bp) protein (697aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
Uncharacterized protein Tax=Acinetobacter sp. CAG:196 RepID=R5T3A8_9GAMM
js4906-27-3_S30_scaffold_40_20
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

23445..23807
DNA (363bp) protein (121aa)
response regulator bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Response regulator {ECO:0000313|EMBL:CDE89457.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
putative phosphate regulon DNA-binding response regulator
js4906-27-3_S30_scaffold_40_21
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

23820..25205
DNA (1386bp) protein (462aa)
Type II secretion system protein E Tax=Clostridium sp. CAG:967 RepID=R5KSQ2_9CLOT
Type II secretion system protein E {ECO:0000313|EMBL:CCY63972.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
type IV-A pilus assembly ATPase PilB
js4906-27-3_S30_scaffold_40_22
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

25220..26368
DNA (1149bp) protein (383aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=Clostridium sp. CAG:715 RepID=R5DHV6_9CLOT
js4906-27-3_S30_scaffold_40_23
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

26380..27354
DNA (975bp) protein (325aa)
Alcohol dehydrogenase GroES domain protein Tax=Brachyspira sp. CAG:484 RepID=R5H3X6_9SPIR
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:CCY24193.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
hypothetical protein
js4906-27-3_S30_scaffold_40_24
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(27432..29606)
DNA (2175bp) protein (725aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5HHC1_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24207.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
CoA-binding protein
js4906-27-3_S30_scaffold_40_25
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(29765..30391)
DNA (627bp) protein (209aa)
Radical SAM domain protein Tax=Clostridium sp. CAG:813 RepID=R7MF19_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:CCY24209.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
radical SAM protein
js4906-27-3_S30_scaffold_40_26
unknown

Not on your lists

comp(30460..30732)
DNA (273bp) protein (91aa)

This feature has no annotations

js4906-27-3_S30_scaffold_40_27
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(30740..31657)
DNA (918bp) protein (306aa)
Putative uncharacterized protein Tax=Clostridium leptum DSM 753 RepID=A7VYT3_9CLOT bin=MEL_C1 species=Clostridium leptum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=MEL_C1 organism_group=Melainabacteria
PSP1 C-terminal domain protein {ECO:0000313|EMBL:CDE88182.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
PSP1 domain-containing protein
js4906-27-3_S30_scaffold_40_28
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(31657..32658)
DNA (1002bp) protein (334aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
glycerol 3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] Tax=Fusobacterium sp. CAG:439 RepID=R7J824_9FUSO
js4906-27-3_S30_scaffold_40_29
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(32668..33543)
DNA (876bp) protein (292aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
N-acetylmuramic acid 6-phosphate etherase Tax=Enterobacteriaceae RepID=MURQ_ECO24 bin=MEL_C1 species=unknown genus=unknown taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=MEL_C1 organism_group=Melainabacteria
murQ; N-acetylmuramic acid 6-phosphate etherase
js4906-27-3_S30_scaffold_40_30
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(33554..34015)
DNA (462bp) protein (154aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
ribH; 6,7-dimethyl-8-ribityllumazine synthase RibH (EC:2.5.1.78)
6,7-dimethyl-8-ribityllumazine synthase Tax=Acinetobacter sp. CAG:196 RepID=R5S8M7_9GAMM
Displaying items 1-30 of 154 in total

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