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js4906-27-3_S30_scaffold_61

Search features with annotation key words

Displaying items 1-30 of 111 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-27-3_S30_scaffold_61_1
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

1..1806
DNA (1806bp) protein (602aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG Tax=Clostridium sp. CAG:813 RepID=R7MIM9_9CLOT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG
js4906-27-3_S30_scaffold_61_2
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1803..2180)
DNA (378bp) protein (126aa)
Uncharacterized protein Tax=Clostridium sp. CAG:306 RepID=R6P679_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC19873.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
js4906-27-3_S30_scaffold_61_3
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(2187..4205)
DNA (2019bp) protein (673aa)
Uncharacterized protein Tax=Clostridium sp. CAG:729 RepID=R7LQB3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE89547.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
js4906-27-3_S30_scaffold_61_4
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(4214..5260)
DNA (1047bp) protein (349aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
Threonine synthase Tax=Fusobacterium sp. CAG:815 RepID=R7LX94_9FUSO
thrC2; threonine synthase
js4906-27-3_S30_scaffold_61_5
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(5263..6585)
DNA (1323bp) protein (441aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
Homoserine dehydrogenase Tax=Brachyspira sp. CAG:484 RepID=R5H2I8_9SPIR
homoserine dehydrogenase
js4906-27-3_S30_scaffold_61_6
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

6637..7872
DNA (1236bp) protein (412aa)
Vitamin K epoxide reductase Tax=Clostridium sp. CAG:967 RepID=R5K945_9CLOT
Vitamin K epoxide reductase {ECO:0000313|EMBL:CCY63258.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
Thiol:disulfide interchange protein dsbA precursor
js4906-27-3_S30_scaffold_61_7
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

7856..8398
DNA (543bp) protein (181aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LWT2_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE91827.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
hypothetical protein
js4906-27-3_S30_scaffold_61_8
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(8756..9964)
DNA (1209bp) protein (403aa)
Elongation factor Tu Tax=Clostridium sp. CAG:768 RepID=R7HWG8_9CLOT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
translation elongation factor 1A (EF-1A/EF-Tu)
js4906-27-3_S30_scaffold_61_9
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(10067..11320)
DNA (1254bp) protein (418aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5H6U0_9SPIR
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
nusA; transcription elongation factor NusA
js4906-27-3_S30_scaffold_61_10
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(11345..11833)
DNA (489bp) protein (163aa)
hypothetical protein; K09748 ribosome maturation factor RimP bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
hypothetical protein
js4906-27-3_S30_scaffold_61_11
GWF2_Melainabacteria_37_15_curated, Melainabacteria, Bacteria

Not on your lists

comp(12010..12516)
DNA (507bp) protein (169aa)
id=3415146 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
Tax=GWF2_Melainabacteria_37_15_curated
js4906-27-3_S30_scaffold_61_12
GWF2_Melainabacteria_37_15_curated, Melainabacteria, Bacteria

Not on your lists

comp(12503..13030)
DNA (528bp) protein (176aa)
id=3415147 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
Tax=GWF2_Melainabacteria_37_15_curated
js4906-27-3_S30_scaffold_61_13
unknown

Not on your lists

comp(13105..13455)
DNA (351bp) protein (117aa)

This feature has no annotations

js4906-27-3_S30_scaffold_61_14
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(13519..14397)
DNA (879bp) protein (293aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
rnhC; ribonuclease HIII (EC:3.1.26.-)
Ribonuclease Tax=Clostridium sp. CAG:768 RepID=R7HVN8_9CLOT
js4906-27-3_S30_scaffold_61_15
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

14438..15190
DNA (753bp) protein (251aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase Tax=Brachyspira sp. CAG:484 RepID=R5H4F5_9SPIR
js4906-27-3_S30_scaffold_61_16
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15203..16228
DNA (1026bp) protein (342aa)
dte:Dester_1175 aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
js4906-27-3_S30_scaffold_61_17

Not on your lists

16348..17196
DNA (849bp) protein (283aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI000347D09F
Uncharacterized protein {ECO:0000313|EMBL:KKT61382.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
putative Fe-S oxidoreductase, SAM radical superfamily
js4906-27-3_S30_scaffold_61_18
Acetobacter sp. CAG:977, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17343..18113
DNA (771bp) protein (257aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:977.;"
udp; uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase Tax=Acetobacter sp. CAG:977 RepID=R5QL87_9PROT
js4906-27-3_S30_scaffold_61_19
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

18232..19407
DNA (1176bp) protein (392aa)
Beta-lactamase domain protein Tax=Clostridium sp. CAG:715 RepID=R5DW94_9CLOT
Beta-lactamase domain protein {ECO:0000313|EMBL:CCX80932.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
beta-lactamase domain-containing protein
js4906-27-3_S30_scaffold_61_20
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

19404..19847
DNA (444bp) protein (148aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase Tax=Clostridium sp. CAG:967 RepID=R5KRM2_9CLOT
js4906-27-3_S30_scaffold_61_21
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

19999..21588
DNA (1590bp) protein (530aa)
Hydroxylamine reductase Tax=Brachyspira sp. CAG:484 RepID=R5HB67_9SPIR
Hydroxylamine reductase {ECO:0000313|EMBL:CCY25359.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
hybrid cluster protein
js4906-27-3_S30_scaffold_61_22
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(21578..22249)
DNA (672bp) protein (224aa)
Uracil phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|SAAS:SAAS00084480};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase Tax=Clostridium sp. CAG:768 RepID=R7I0A8_9CLOT
js4906-27-3_S30_scaffold_61_23
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(22209..22937)
DNA (729bp) protein (243aa)
Mammalian cell entry related domain protein Tax=Clostridium sp. CAG:967 RepID=R5K923_9CLOT
Mammalian cell entry related domain protein {ECO:0000313|EMBL:CCY63280.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
js4906-27-3_S30_scaffold_61_24
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

22941..23174
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Acinetobacter sp. CAG:196 RepID=R5S9B0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CCZ49583.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
js4906-27-3_S30_scaffold_61_25
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

23208..24008
DNA (801bp) protein (267aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase Tax=Clostridium sp. CAG:768 RepID=R7I0B5_9CLOT
js4906-27-3_S30_scaffold_61_26
unknown

Not on your lists

comp(24050..24313)
DNA (264bp) protein (88aa)

This feature has no annotations

js4906-27-3_S30_scaffold_61_27
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24344..25357)
DNA (1014bp) protein (338aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase Tax=Clostridium sp. CAG:306 RepID=R6QG93_9CLOT
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase {ECO:0000313|EMBL:CDC20942.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
js4906-27-3_S30_scaffold_61_28
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

25452..26747
DNA (1296bp) protein (432aa)
Geranylgeranyl reductase Tax=Clostridium sp. CAG:768 RepID=R7I1B9_9CLOT
Geranylgeranyl reductase {ECO:0000313|EMBL:CDE44277.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
FAD dependent oxidoreductase
js4906-27-3_S30_scaffold_61_29
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

26740..27018
DNA (279bp) protein (93aa)
Ferredoxin-like protein Tax=Clostridium sp. CAG:967 RepID=R5K9P5_9CLOT
Ferredoxin-like protein {ECO:0000313|EMBL:CCY63448.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
hypothetical protein
js4906-27-3_S30_scaffold_61_30
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

27041..27409
DNA (369bp) protein (123aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LVV5_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE91858.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
Displaying items 1-30 of 111 in total

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