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js4906-27-3_S30_scaffold_76

Search features with annotation key words

Displaying items 1-30 of 231 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-27-3_S30_scaffold_76_1
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(1..240)
DNA (240bp) protein (80aa)
transmembrane_regions 78..100 bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
General secretion pathway protein G {ECO:0000313|EMBL:CDE44961.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
js4906-27-3_S30_scaffold_76_2
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(448..1284)
DNA (837bp) protein (279aa)
Flagellar hook protein FlgE Tax=Brachyspira sp. CAG:484 RepID=R5HK21_9SPIR
Flagellar hook protein FlgE {ECO:0000313|EMBL:CCY25172.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
fagellar hook-basal body protein
js4906-27-3_S30_scaffold_76_3
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(1277..2359)
DNA (1083bp) protein (361aa)
seg 4..15 bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CDE43937.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
js4906-27-3_S30_scaffold_76_4
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(2356..2835)
DNA (480bp) protein (160aa)
Flagellar biosynthesis chaperone Tax=Clostridium sp. CAG:729 RepID=R7LM78_9CLOT
Flagellar biosynthesis chaperone {ECO:0000313|EMBL:CDE88482.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
hypothetical protein
js4906-27-3_S30_scaffold_76_5
unknown

Not on your lists

comp(3100..3204)
DNA (105bp) protein (35aa)

This feature has no annotations

js4906-27-3_S30_scaffold_76_6
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3230..3529)
DNA (300bp) protein (100aa)
Anti-sigma factor antagonist Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0RVZ2_BUTPB
anti-sigma factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
js4906-27-3_S30_scaffold_76_7
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

3674..4180
DNA (507bp) protein (169aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
Ferroxidase (EC:1.16.3.1)
Uncharacterized protein Tax=Acinetobacter sp. CAG:196 RepID=R5S9I3_9GAMM
js4906-27-3_S30_scaffold_76_8
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(4543..7203)
DNA (2661bp) protein (887aa)
ppdK; pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase Tax=Acinetobacter sp. CAG:196 RepID=R5STS3_9GAMM
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CCZ50171.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
js4906-27-3_S30_scaffold_76_9
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(7321..8787)
DNA (1467bp) protein (489aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase Tax=Clostridium sp. CAG:967 RepID=R5KP52_9CLOT
js4906-27-3_S30_scaffold_76_10
unknown

Not on your lists

comp(8807..9145)
DNA (339bp) protein (113aa)

This feature has no annotations

js4906-27-3_S30_scaffold_76_11
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(9158..10057)
DNA (900bp) protein (300aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
Pseudouridine synthase Tax=Clostridium sp. CAG:715 RepID=R5DXD6_9CLOT
pseudouridylate synthase
js4906-27-3_S30_scaffold_76_12
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(10057..10518)
DNA (462bp) protein (154aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
Lipoprotein signal peptidase Tax=Fusobacterium sp. CAG:439 RepID=R7J9F7_9FUSO
lspA; lipoprotein signal peptidase
js4906-27-3_S30_scaffold_76_13
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(10502..11419)
DNA (918bp) protein (306aa)
Uncharacterized protein Tax=Clostridium sp. CAG:768 RepID=R7HSH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE42644.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
js4906-27-3_S30_scaffold_76_14
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(11481..11636)
DNA (156bp) protein (52aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5H5C7_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24703.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-27-3_S30_scaffold_76_15
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(11747..13033)
DNA (1287bp) protein (429aa)
mcl:MCCL_1282 obgE; GTPase ObgE; K03979 GTP-binding protein bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
obgE; GTPase ObgE
js4906-27-3_S30_scaffold_76_16
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists


13087..14154
DNA (1068bp) protein (356aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase Tax=Brachyspira sp. CAG:484 RepID=R5HKS9_9SPIR
js4906-27-3_S30_scaffold_76_17
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(14162..15511)
DNA (1350bp) protein (450aa)
accC1: biotin carboxylase 1 (EC:6.3.4.14 6.4.1.2)
Acetyl-CoA carboxylase biotin carboxylase Tax=Brachyspira sp. CAG:484 RepID=R5H4H3_9SPIR
Acetyl-CoA carboxylase biotin carboxylase {ECO:0000313|EMBL:CCY24575.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-27-3_S30_scaffold_76_18
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

Not on your lists

comp(15521..15940)
DNA (420bp) protein (140aa)
Biotin carboxyl carrier protein of acetyl-CoA carboxylase Tax=uncultured bacterium RepID=K2EEP1_9BACT
Biotin carboxyl carrier protein of acetyl-CoA carboxylase
Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
js4906-27-3_S30_scaffold_76_19
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15962..16519)
DNA (558bp) protein (186aa)
Elongation factor P Tax=Clostridium sp. CAG:306 RepID=R6P4U8_9CLOT
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
efp; translation elongation factor P
js4906-27-3_S30_scaffold_76_20
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(16619..17263)
DNA (645bp) protein (215aa)
Tetratricopeptide repeat protein Tax=Clostridium sp. CAG:729 RepID=R7LPW0_9CLOT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDE89392.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
hypothetical protein
js4906-27-3_S30_scaffold_76_21
unknown

Not on your lists

17394..17978
DNA (585bp) protein (195aa)
Striated muscle preferentially expressed protein kinase Tax=Clonorchis sinensis RepID=G7Y5N7_CLOSI
js4906-27-3_S30_scaffold_76_22
unknown

Not on your lists

comp(18025..18642)
DNA (618bp) protein (206aa)

This feature has no annotations

js4906-27-3_S30_scaffold_76_23
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(18741..20045)
DNA (1305bp) protein (435aa)
Uncharacterized protein Tax=Clostridium sp. CAG:729 RepID=R7LKV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE87992.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
hypothetical protein
js4906-27-3_S30_scaffold_76_24
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(20058..21419)
DNA (1362bp) protein (454aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:439 RepID=R7J6J9_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE59559.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
js4906-27-3_S30_scaffold_76_25
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(21435..22616)
DNA (1182bp) protein (394aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LZU4_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE92982.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-27-3_S30_scaffold_76_26
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

22689..24116
DNA (1428bp) protein (476aa)
Iron-only hydrogenase maturation rSAM protein HydG Tax=Clostridium sp. CAG:813 RepID=R7MFE8_9CLOT
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:CDE99784.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
iron-only hydrogenase maturation protein HydG
js4906-27-3_S30_scaffold_76_27
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24132..25007
DNA (876bp) protein (292aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
Glucose-1-phosphate thymidylyltransferase Tax=Clostridium sp. CAG:306 RepID=R6PFR4_9CLOT
dTDP-glucose pyrophosphorylase
js4906-27-3_S30_scaffold_76_28
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

25067..25366
DNA (300bp) protein (100aa)
Thioredoxin Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QH40_9EURY bin=MEL_C1 species=Candidatus Nanosalina sp. J07AB43 genus=Candidatus Nanosalina taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota tax=MEL_C1 organism_group=Melainabacteria
Thioredoxin {ECO:0000313|EMBL:CDE92866.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
trxA; Thioredoxin
js4906-27-3_S30_scaffold_76_29
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(25347..26228)
DNA (882bp) protein (294aa)
Uncharacterized protein Tax=Clostridium sp. CAG:813 RepID=R7MDY5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE97957.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
hypothetical protein
js4906-27-3_S30_scaffold_76_30
unknown

Not on your lists

26278..26475
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying items 1-30 of 231 in total

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