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js4906-27-3_S30_scaffold_351

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-27-3_S30_scaffold_351_1
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(150..635)
DNA (486bp) protein (162aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5H5G6_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24748.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-27-3_S30_scaffold_351_2
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(747..1169)
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Clostridium sp. CAG:768 RepID=R7I0J5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE45439.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
js4906-27-3_S30_scaffold_351_3
unknown

Not on your lists

1321..1527
DNA (207bp) protein (69aa)

This feature has no annotations

js4906-27-3_S30_scaffold_351_4
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(1590..2024)
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5HIT6_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24621.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-27-3_S30_scaffold_351_5
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(1987..3045)
DNA (1059bp) protein (353aa)
Uncharacterized protein Tax=Acinetobacter sp. CAG:196 RepID=R5S8Y9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CCZ50080.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
hypothetical protein
js4906-27-3_S30_scaffold_351_6
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

3119..3712
DNA (594bp) protein (198aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
def1; polypeptide deformylase (EC:3.5.1.88)
Peptide deformylase 1B, chloroplastic Tax=Oryza RepID=DEF1B_ORYSJ bin=MEL_C2 species=unknown genus=Oryza taxon_order=Poales taxon_class=Liliopsida phylum=Streptophyta tax=MEL_C2 organism_group=Melainabacteria
js4906-27-3_S30_scaffold_351_7
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

3705..4652
DNA (948bp) protein (316aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
Methionyl-tRNA formyltransferase Tax=Fusobacterium sp. CAG:439 RepID=R7JFZ8_9FUSO
methionyl-tRNA formyltransferase
js4906-27-3_S30_scaffold_351_8
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

4637..4972
DNA (336bp) protein (112aa)
aroH; chorismate mutase (EC:5.4.99.5)
Uncharacterized protein Tax=Clostridium sp. CAG:715 RepID=R5DMA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX79909.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-27-3_S30_scaffold_351_9
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

5033..5728
DNA (696bp) protein (232aa)
Uncharacterized protein Tax=Clostridium sp. CAG:715 RepID=R5DP69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX80574.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-27-3_S30_scaffold_351_10
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

5885..7015
DNA (1131bp) protein (377aa)
Carboxyl--terminal protease Tax=Brachyspira sp. CAG:484 RepID=R5HG78_9SPIR
Carboxyl--terminal protease {ECO:0000313|EMBL:CCY23741.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
carboxyl--terminal protease
js4906-27-3_S30_scaffold_351_11
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(7025..8719)
DNA (1695bp) protein (565aa)
Uncharacterized protein Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UDF4_CYAP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADN14145.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
js4906-27-3_S30_scaffold_351_12
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8745..10397)
DNA (1653bp) protein (551aa)
Uncharacterized protein Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UDF4_CYAP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADN14145.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
js4906-27-3_S30_scaffold_351_13

Not on your lists

10453..11157
DNA (705bp) protein (235aa)
glycosyl transferase family 2 protein bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Glycosyl transferase family 2 protein {ECO:0000313|EMBL:EKE04627.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
dolichol-p-glucose synthetase
js4906-27-3_S30_scaffold_351_14
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(11154..12149)
DNA (996bp) protein (332aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
tRNA-U20-dihydrouridine synthase bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
nifR3 family TIM-barrel protein
js4906-27-3_S30_scaffold_351_15
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(12142..14247)
DNA (2106bp) protein (702aa)
Tetratricopeptide TPR_1 repeat-containing protein Tax=Clostridium sp. CAG:768 RepID=R7HUJ4_9CLOT
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:CDE42911.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
hypothetical protein
js4906-27-3_S30_scaffold_351_16
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

14421..15032
DNA (612bp) protein (204aa)
Peptidase S15 Tax=Clostridium sp. CAG:715 RepID=R5DY12_9CLOT
Peptidase S15 {ECO:0000313|EMBL:CCX80881.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-27-3_S30_scaffold_351_17
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(15037..15945)
DNA (909bp) protein (303aa)
Oligopeptide/dipeptide ABC transporter ATPase subunit Tax=Fusobacterium sp. CAG:815 RepID=R7LV16_9FUSO
Oligopeptide/dipeptide ABC transporter ATPase subunit {ECO:0000313|EMBL:CDE91906.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
ykfD; oligopeptide ABC transporter ATP-binding protein
js4906-27-3_S30_scaffold_351_18
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(15995..16591)
DNA (597bp) protein (199aa)
Recombination protein RecR Tax=Clostridium sp. CAG:768 RepID=R7HRV4_9CLOT
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
recombinase RecR
js4906-27-3_S30_scaffold_351_19
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(16591..16923)
DNA (333bp) protein (111aa)
Nucleoid-associated protein BN657_01538 Tax=Fusobacterium sp. CAG:439 RepID=R7J5W4_9FUSO
Nucleoid-associated protein BN657_01538 {ECO:0000256|HAMAP-Rule:MF_00274}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
hypothetical protein
js4906-27-3_S30_scaffold_351_20
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

17048..17758
DNA (711bp) protein (237aa)
Gll3042 protein Tax=Clostridium sp. CAG:967 RepID=R5KAN5_9CLOT
Gll3042 protein {ECO:0000313|EMBL:CCY63838.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
hypothetical protein
js4906-27-3_S30_scaffold_351_21
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

17806..18669
DNA (864bp) protein (288aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
accD; acetyl-CoA carboxylase, carboxyl transferase subuit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta Tax=Brachyspira sp. CAG:484 RepID=R5H8Q7_9SPIR
js4906-27-3_S30_scaffold_351_22
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

18686..19651
DNA (966bp) protein (322aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha Tax=Acinetobacter sp. CAG:196 RepID=R5S9W6_9GAMM
acetyl-CoA carboxylase, carboxyl transferase subunit alpha
js4906-27-3_S30_scaffold_351_23
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

19633..20361
DNA (729bp) protein (243aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
3-deoxy-manno-octulosonate cytidylyltransferase Tax=Brachyspira sp. CAG:484 RepID=R5HID1_9SPIR
3-deoxy-D-manno-octulosonate cytidylyltransferase
js4906-27-3_S30_scaffold_351_24
unknown

Not on your lists

comp(20345..20572)
DNA (228bp) protein (76aa)

This feature has no annotations

js4906-27-3_S30_scaffold_351_25
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(20565..21437)
DNA (873bp) protein (291aa)
Glucokinase (EC:2.7.1.2)
Putative glucokinase Tax=Clostridium sp. CAG:813 RepID=R7MBY9_9CLOT
Putative glucokinase {ECO:0000313|EMBL:CDE98599.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-27-3_S30_scaffold_351_26
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(21440..22120)
DNA (681bp) protein (227aa)
N-acetylmannosamine-6-phosphate epimerase; K01788 N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
nitronate monooxygenase family protein
js4906-27-3_S30_scaffold_351_27
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

22256..22840
DNA (585bp) protein (195aa)
RNA polymerase sigma-E factor Tax=Clostridium sp. CAG:715 RepID=R5DJ99_9CLOT
RNA polymerase sigma-E factor {ECO:0000313|EMBL:CCX80315.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
RNA polymerase sigma factor RpoE
js4906-27-3_S30_scaffold_351_28
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

22857..23324
DNA (468bp) protein (156aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5H744_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY25318.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-27-3_S30_scaffold_351_29
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(23289..24647)
DNA (1359bp) protein (453aa)
O-antigen polymerase Tax=Brachyspira sp. CAG:484 RepID=R5HBS3_9SPIR
O-antigen polymerase {ECO:0000313|EMBL:CCY25524.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
heptosyltransferase family
js4906-27-3_S30_scaffold_351_30
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(24637..25149)
DNA (513bp) protein (171aa)
hypothetical protein bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CCX80006.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
hypothetical protein
Displaying items 1-30 of 43 in total

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