ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

js4906-27-3_S30_scaffold_76_130

Organism: js4906-27-3_S30_Melainabacteria_curated_32_34

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(117956..118222)

Top 3 Functional Annotations

Value Algorithm Source
Zinc finger, ClpX C4-type 32..66 bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 90.0
  • Bit_score: 147
  • Evalue 5.70e-33
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000313|EMBL:CCX79928.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 90.0
  • Bit_score: 145
  • Evalue 2.30e-32
Clp protease ClpX similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 41.0
  • Bit_score: 51
  • Evalue 9.20e-05

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:715 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGTCAGAAGAAAAAGTAATTAAACTCGGCTCTAAAAAGGCAAAAAAGGTTCATGAAGAAAGTGAAAGCAATCAATCAGAGGTTGTTTACTGTTCTTTTTGCGGAAGGCCGAATACACAAGTTATAAAAATGGTACAAGGTCCAGGGGTAAACATTTGTTCTGAATGCACCATGATTGCAGTTCAATACCTAATTTTGAATGACAGAATGCCTTCTGCTGAAGCACAGGTTATTTTAGATGCGTTCTGGGGGAAATGTAAACGATGA
PROTEIN sequence
Length: 89
MSEEKVIKLGSKKAKKVHEESESNQSEVVYCSFCGRPNTQVIKMVQGPGVNICSECTMIAVQYLILNDRMPSAEAQVILDAFWGKCKR*