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LSDeep1_scaffold_42_prodigal-single

Search features with annotation key words

Displaying items 31-60 of 536 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LSDeep1_scaffold_42_prodigal-single_31
unknown

Not on your lists

21970..22497
-----------------
DNA (528bp)
protein (176aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_32
unknown

Not on your lists

22607..22927
-----------------
DNA (321bp)
protein (107aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_33
unknown

Not on your lists

22929..23420
-----------------
DNA (492bp)
protein (164aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_34
unknown

Not on your lists

23466..24422
-----------------
DNA (957bp)
protein (319aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_trna_22
unknown

Not on your lists

comp(24516..24589)
-----------------
DNA (74bp)
transferRNA Undet
LSDeep1_scaffold_42_prodigal-single_35
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24855..25460)
-----------------
DNA (606bp)
protein (202aa)
Sulfur carrier protein adenylyltransferase ThiF n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S7Z5_9DELT
Thiazole biosynthesis protein ThiF {ECO:0000313|EMBL:AKF80128.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
ThiF domain-containing protein
LSDeep1_scaffold_42_prodigal-single_36
unknown

Not on your lists

25546..26358
-----------------
DNA (813bp)
protein (271aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_37
unknown

Not on your lists

comp(26362..26688)
-----------------
DNA (327bp)
protein (109aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_38
unknown

Not on your lists

comp(26692..27147)
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_39
unknown

Not on your lists

comp(27149..27346)
-----------------
DNA (198bp)
protein (66aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_40
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(27336..28352)
-----------------
DNA (1017bp)
protein (339aa)
Uncharacterized protein id=3822729 bin=GWB1_Spirochaetes_59_5 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_41

Not on your lists

comp(28356..29246)
-----------------
DNA (891bp)
protein (297aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL26267.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LSDeep1_scaffold_42_prodigal-single_42
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(29265..31223)
-----------------
DNA (1959bp)
protein (653aa)
Uncharacterized protein id=3822726 bin=GWB1_Spirochaetes_59_5 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_43
unknown

Not on your lists

comp(31360..31998)
-----------------
DNA (639bp)
protein (213aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_trna_21
unknown

Not on your lists

comp(32045..32134)
-----------------
DNA (90bp)
transferRNA Ser
LSDeep1_scaffold_42_prodigal-single_44
unknown

Not on your lists

32191..32409
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_45
Acinetobacter phage 133, T4likevirus, Caudovirales, Viruses

Not on your lists

comp(32370..33155)
-----------------
DNA (786bp)
protein (262aa)
Putative Seg-like homing endonuclease GIY-YIG family n=1 Tax=Acinetobacter phage 133 RepID=D9I671_9CAUD
Putative Seg-like homing endonuclease GIY-YIG family {ECO:0000313|EMBL:ADJ19452.1}; TaxID=279006 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Acinetobacter phage 133.;"
LSDeep1_scaffold_42_prodigal-single_46
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33227..34420)
-----------------
DNA (1194bp)
protein (398aa)
Elongation factor Tu n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QLU0_9CAUL
Elongation factor Tu {ECO:0000256|RuleBase:RU004061}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis biprosthecum C19.;"
translation elongation factor 1A (EF-1A/EF-Tu)
LSDeep1_scaffold_42_prodigal-single_trna_20
unknown

Not on your lists

comp(34528..34615)
-----------------
DNA (88bp)
transferRNA Leu
LSDeep1_scaffold_42_prodigal-single_trna_19
unknown

Not on your lists

comp(34622..34706)
-----------------
DNA (85bp)
transferRNA Leu
LSDeep1_scaffold_42_prodigal-single_trna_18
unknown

Not on your lists

comp(34766..34844)
-----------------
DNA (79bp)
transferRNA Pseudo
LSDeep1_scaffold_42_prodigal-single_trna_17
unknown

Not on your lists

comp(34928..35014)
-----------------
DNA (87bp)
transferRNA Leu
LSDeep1_scaffold_42_prodigal-single_trna_16
unknown

Not on your lists

comp(35057..35147)
-----------------
DNA (91bp)
transferRNA Ser
LSDeep1_scaffold_42_prodigal-single_trna_15
unknown

Not on your lists

comp(35152..35238)
-----------------
DNA (87bp)
transferRNA Tyr
LSDeep1_scaffold_42_prodigal-single_trna_14
unknown

Not on your lists

comp(35243..35331)
-----------------
DNA (89bp)
transferRNA Leu
LSDeep1_scaffold_42_prodigal-single_47
unknown

Not on your lists

35765..36109
-----------------
DNA (345bp)
protein (115aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_48
unknown

Not on your lists

36106..36537
-----------------
DNA (432bp)
protein (144aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_49
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(36526..37092)
-----------------
DNA (567bp)
protein (189aa)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NQF6_9CLOT
nicotinate-nucleotide adenylyltransferase
Tax=GWF2_Lentisphaerae_44_16_curated
LSDeep1_scaffold_42_prodigal-single_50
unknown

Not on your lists

comp(37089..37325)
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_51
unknown

Not on your lists

37393..38253
-----------------
DNA (861bp)
protein (287aa)

This feature has no annotations

Displaying items 31-60 of 536 in total

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