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LSDeep1_scaffold_42_prodigal-single

Search features with annotation key words

Displaying items 1-30 of 536 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LSDeep1_scaffold_42_prodigal-single_1
R_SM2F11_46_24, SM2F11, Bacteria

Not on your lists

1..1437
DNA (1437bp) protein (479aa)
Uncharacterized protein id=1967783 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_24_curated
LSDeep1_scaffold_42_prodigal-single_2
unknown

Not on your lists

1561..1926
DNA (366bp) protein (122aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_3
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

1926..2327
DNA (402bp) protein (134aa)
id=3954247 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_4

Not on your lists

2327..2665
DNA (339bp) protein (113aa)
Marine sediment metagenome DNA, contig: S01H1_S06168 {ECO:0000313|EMBL:GAG12786.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LSDeep1_scaffold_42_prodigal-single_5
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

2665..3087
DNA (423bp) protein (141aa)
id=3954249 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_6
unknown

Not on your lists

comp(3084..3284)
DNA (201bp) protein (67aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_7
unknown

Not on your lists

3372..4475
DNA (1104bp) protein (368aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_8
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

4529..5518
DNA (990bp) protein (330aa)
id=3532118 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_9
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

5506..7056
DNA (1551bp) protein (517aa)
id=3532111 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_10
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

7167..7568
DNA (402bp) protein (134aa)
id=3532103 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
FmdB family transcriptional regulator
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_11
unknown

Not on your lists

7565..8260
DNA (696bp) protein (232aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_12
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

8311..8562
DNA (252bp) protein (84aa)
id=3532007 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_13
unknown

Not on your lists

8578..9774
DNA (1197bp) protein (399aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_14
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

9938..10906
DNA (969bp) protein (323aa)
id=3954252 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_15
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

10875..12197
DNA (1323bp) protein (441aa)
Csr/MutH/archaeal HJR family nuclease id=3954253 bin=GWB1_Spirochaetes_59_5 species=Marseillevirus genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_16
unknown

Not on your lists

12201..12422
DNA (222bp) protein (74aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_17
unknown

Not on your lists

comp(12502..12813)
DNA (312bp) protein (104aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_18
unknown

Not on your lists

comp(12871..13371)
DNA (501bp) protein (167aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_19
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

comp(13372..14196)
DNA (825bp) protein (275aa)
Putative uncharacterized protein id=3413203 bin=GWC1_Spirochaetes_27_15 species=Pseudoalteromonas atlantica genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
hypothetical protein
Tax=GWD1_Spirochaetes_27_9_curated
LSDeep1_scaffold_42_prodigal-single_20
unknown

Not on your lists

14282..14503
DNA (222bp) protein (74aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_21
unknown

Not on your lists

comp(14482..14862)
DNA (381bp) protein (127aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_22
unknown

Not on your lists

14994..15200
DNA (207bp) protein (69aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_23
unknown

Not on your lists

comp(15197..15718)
DNA (522bp) protein (174aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_24

Not on your lists

15786..16178
DNA (393bp) protein (131aa)
Ydg n=1 Tax=Burkholderia pseudomallei Pasteur 52237 RepID=A8KSX5_BURPE
Marine sediment metagenome DNA, contig: S06H3_S07656 {ECO:0000313|EMBL:GAI18590.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Plasmid related protein
LSDeep1_scaffold_42_prodigal-single_25
unknown

Not on your lists

16204..16887
DNA (684bp) protein (228aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_26
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(16889..17218)
DNA (330bp) protein (110aa)
id=3954338 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_27
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(17318..18079)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI000382E8A7
cytoplasmic protein
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
LSDeep1_scaffold_42_prodigal-single_28
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

18328..18975
DNA (648bp) protein (216aa)
id=3256088 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_29
R_RIF_OD1_13_51_17, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(18995..19936)
DNA (942bp) protein (314aa)
Abortive infection protein id=1748020 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_13_51_17_curated
LSDeep1_scaffold_42_prodigal-single_30
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20027..21616)
DNA (1590bp) protein (530aa)
von Willebrand factor type A n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UFP8_ANASK
von Willebrand factor A
von Willebrand factor type A {ECO:0000313|EMBL:ACG75175.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
Displaying items 1-30 of 536 in total

View Taxonomy