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LSDeep1_scaffold_42_prodigal-single

Search features with annotation key words

Displaying items 151-180 of 536 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LSDeep1_scaffold_42_prodigal-single_142
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147059..148090)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G7U7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM78040.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
hypothetical protein
LSDeep1_scaffold_42_prodigal-single_143
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

148262..153616
DNA (5355bp) protein (1785aa)
Gp420 id=2790180 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_144
unknown

Not on your lists

153616..153981
DNA (366bp) protein (122aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_145
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

153994..154575
DNA (582bp) protein (194aa)
Putative uncharacterized protein id=3733416 bin=GWB1_Spirochaetes_59_5 species=Drosophila willistoni genus=Drosophila taxon_order=Diptera taxon_class=Insecta phylum=Arthropoda tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_146
unknown

Not on your lists

154616..155404
DNA (789bp) protein (263aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_147
unknown

Not on your lists

155401..155976
DNA (576bp) protein (192aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_148
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

156054..157667
DNA (1614bp) protein (538aa)
SNF2 family protein id=4026560 bin=GWB1_Spirochaetes_59_5 species=Streptococcus constellatus genus=Streptococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
ATP-dependent helicase
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_149
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

157664..158488
DNA (825bp) protein (275aa)
id=4026559 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_150
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

158485..161313
DNA (2829bp) protein (943aa)
Lipoprotein, putative id=2649172 bin=GWB1_Spirochaetes_59_5 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
DNA helicase
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_151
Mycobacterium phage Bobi, Caudovirales, Viruses

Not on your lists

161310..162923
DNA (1614bp) protein (538aa)
anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2)
DNA methylase n=1 Tax=Mycobacterium phage Bobi RepID=S5W031_9CAUD
DNA methylase {ECO:0000313|EMBL:AGS82265.1}; TaxID=1340708 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Mycobacterium phage Bobi.;"
LSDeep1_scaffold_42_prodigal-single_152

Not on your lists

162920..163513
DNA (594bp) protein (198aa)
deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K4A4_DESAC
Uncharacterized protein {ECO:0000313|EMBL:KKK57844.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LSDeep1_scaffold_42_prodigal-single_153
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

163510..164130
DNA (621bp) protein (207aa)
Thymidine kinase id=3317245 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
thymidine kinase
Tax=GWB1_Bdellovibrionales_55_8_curated
LSDeep1_scaffold_42_prodigal-single_154
unknown

Not on your lists

164127..164513
DNA (387bp) protein (129aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_155
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

164504..166018
DNA (1515bp) protein (505aa)
Modification methylase id=2649164 bin=GWB1_Spirochaetes_59_5 species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
DNA methyltransferase
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_156
unknown

Not on your lists

166024..166497
DNA (474bp) protein (158aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_157
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

166505..167284
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Paenibacillus sp. A9 RepID=UPI000369FF3B
Uncharacterized protein {ECO:0000313|EMBL:KJE36582.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;"
metallo-beta-lactamase family protein
LSDeep1_scaffold_42_prodigal-single_158
unknown

Not on your lists

167329..167598
DNA (270bp) protein (90aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_159
unknown

Not on your lists

167679..168362
DNA (684bp) protein (228aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_160

Not on your lists

168517..169446
DNA (930bp) protein (310aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM66340.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LSDeep1_scaffold_42_prodigal-single_161
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

169443..171170
DNA (1728bp) protein (576aa)
DNA ligase (EC:6.5.1.2)
DNA ligase id=2492262 bin=GWB1_Spirochaetes_59_5 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_162
unknown

Not on your lists

171225..171488
DNA (264bp) protein (88aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_163
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

171507..173066
DNA (1560bp) protein (520aa)
id=2492276 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LSDeep1_scaffold_42_prodigal-single_164
unknown

Not on your lists

173066..173311
DNA (246bp) protein (82aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_165
unknown

Not on your lists

173316..173507
DNA (192bp) protein (64aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_166
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173501..174181
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Aeromonas molluscorum 848 RepID=R1H2X0_9GAMM
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
LSDeep1_scaffold_42_prodigal-single_167
unknown

Not on your lists

174269..174448
DNA (180bp) protein (60aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_168
unknown

Not on your lists

174438..174977
DNA (540bp) protein (180aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_169
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

175072..177531
DNA (2460bp) protein (820aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TLI2_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD24661.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
LSDeep1_scaffold_42_prodigal-single_170
unknown

Not on your lists

177620..178450
DNA (831bp) protein (277aa)

This feature has no annotations

LSDeep1_scaffold_42_prodigal-single_171
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

178558..179514
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZA9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM80993.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
Displaying items 151-180 of 536 in total

View Taxonomy