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LSDeep1_scaffold_42_prodigal-single_174

Organism: LS_PHAGE_CIR_60_22

RP 0 / 55 BSCG 1 / 51 ASCG 0 / 38
Location: 180766..181611

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Clostridium sp. CAG:568 RepID=R5ZBT5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 41.6
  • Coverage: 274.0
  • Bit_score: 198
  • Evalue 6.80e-48
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262821 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.6
  • Coverage: 274.0
  • Bit_score: 198
  • Evalue 9.60e-48
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 274.0
  • Bit_score: 190
  • Evalue 5.30e-46

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Taxonomy

Clostridium sp. CAG:568 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 846
ATGGATCAGAGTGACGATCTCCTCAAGGCTTTCATGCGGGACATGGGACGCCACAAGCTGCTCACCCGTGAGCAGGAACAGGTTCTTGCCCAGACGATCCGAGACAGCAAAGATGAGGTCGCCGCTCAGGCTGCTCGGGTCCAAATGGTCAACTCCAACTTGAGGCTGGTGGTTTCGATTGCCCGTAAGGAGAGTCGCTACTTCCCGAGCACTCCCTTGATCGATCTCATTCAGGAAGGGGTCATTGGGTTGATGAAAGCCGTGGAGAAGTTTGACCCTGACCGGGGGTTCAAGTTCTCGACCTACAGCTCCTGGTGGATTCGTCAGGGCATCCACAGGTCAGGCCAACTCGACAACTTGGTCCACGTTCCCATCTACCAGCAGGAGAACTGCTTCAGGCTCTACCAGATGGAGAAGTCGCTGGCCCGGAAGGGCAAGGAGCCTACGGACGCTGAGCTGGAAGCTGAACTCCGTTGGAAGCCAGGCACCGTAGCCAAGGTCCGGTCCTACCTGCGGAACACGGTCTCAATGGAGCAACCACTTGGAGAGGGGAGTGATTCCACCCTCAAGGACGTGCTGGAGGATCACGACGTGGTGCTGCCAGAGACGAATCTCCTGGAGGACAACCTCTCTCAGTTCCTGGCGAGCGTGTTCGAGGAAATCCTGGACGACAGAGAACGAGAAATCCTGGTGAAGCGGTATGGGCTGGACGGCGATGGTGAATGCAGCTTGGGGGTCATAGGAGACATGCTCGACATTCAAGTGACTCGCGAGAGGGTTCGCCAGATCCAGGCAAAGGCAGAGAAGAAGCTGAGGTTGAGGATGTTGAAGTTCGATGTCCTCTGA
PROTEIN sequence
Length: 282
MDQSDDLLKAFMRDMGRHKLLTREQEQVLAQTIRDSKDEVAAQAARVQMVNSNLRLVVSIARKESRYFPSTPLIDLIQEGVIGLMKAVEKFDPDRGFKFSTYSSWWIRQGIHRSGQLDNLVHVPIYQQENCFRLYQMEKSLARKGKEPTDAELEAELRWKPGTVAKVRSYLRNTVSMEQPLGEGSDSTLKDVLEDHDVVLPETNLLEDNLSQFLASVFEEILDDREREILVKRYGLDGDGECSLGVIGDMLDIQVTRERVRQIQAKAEKKLRLRMLKFDVL*