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MEL_B1_7

Search features with annotation key words

Displaying items 61-78 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MEL_B1_7_61
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(66779..67849)
DNA (1071bp) protein (357aa)
hypothetical protein
TPR repeat-containing protein n=1 Tax=Brachyspira murdochii DSM 12563 RepID=D5U4Z0_BRAM5 (db=UNIREF evalue=9.9e-32 bit_score=143.0 identity=25.1 coverage=93.55742296918767)
seg (db=Seg db_id=seg from=276 to=290)
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=1 to=226 evalue=3.9e-47 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
MEL_B1_7_62
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(67856..68263)
DNA (408bp) protein (136aa)
Iojap-like protein
iojap_ybeB: iojap-like ribosome-associated (db=HMMTigr db_id=TIGR00090 from=10 to=109 evalue=1.3e-32 interpro_id=IPR004394 interpro_description=Ribosome-associated, Iojap-like)
(db=HMMPfam db_id=PF02410 from=13 to=109 evalue=1.1e-27 interpro_id=IPR004394 interpro_description=Ribosome-associated, Iojap-like)
IOJAP SUPERFAMILY ORTHOLOG (db=HMMPanther db_id=PTHR21043 from=14 to=135 evalue=7.0e-21 interpro_id=IPR004394 interpro_description=Ribosome-associated, Iojap-like)
MEL_B1_7_63
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(68260..68691)
DNA (432bp) protein (144aa)
ribose-5-phosphate isomerase B (EC:5.3.1.6)
rpiB: ribose 5-phosphate isomerase B (db=HMMTigr db_id=TIGR01120 from=3 to=143 evalue=9.1e-74 interpro_id=IPR004785 interpro_description=Ribose 5-phosphate isomerase B GO=Molecular Function: ribose-5-phosphate isomerase activity (GO:0004751), Biological Process: pentose-phosphate shunt (GO:0006098))
Sugar-phosphate isomerase, RpiB/LacA/LacB types (db=HMMPIR db_id=PIRSF005384 from=1 to=143 evalue=9.4e-73 interpro_id=IPR003500 interpro_description=Ribose/galactose isomerase GO=Biological Process: carbohydrate metabolic process (GO:0005975))
rpiB_lacA_lacB: sugar-phosphate isomer (db=HMMTigr db_id=TIGR00689 from=4 to=143 evalue=1.2e-71 interpro_id=IPR003500 interpro_description=Ribose/galactose isomerase GO=Biological Process: carbohydrate metabolic process (GO:0005975))
MEL_B1_7_64
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

68774..69553
DNA (780bp) protein (260aa)
68774..69553 + ( gc_cont=0.328)
Uncharacterized protein {ECO:0000313|EMBL:CCZ50077.1}; TaxID=1262690 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" sou
MEL_B1_7_65
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(69531..70781)
DNA (1251bp) protein (417aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
seg (db=Seg db_id=seg from=104 to=115)
SENSORY TRANSDUCTION HISTIDINE KINASE (DHKB) (db=HMMPanther db_id=PTHR23283:SF47 from=7 to=416 evalue=2.9e-86)
SENSOR HISTIDINE KINASE-RELATED (db=HMMPanther db_id=PTHR23283 from=7 to=416 evalue=2.9e-86)
MEL_B1_7_66
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(70870..73866)
DNA (2997bp) protein (999aa)
Putative uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D5A2_PELTS (db=UNIREF evalue=0.0 bit_score=691.0 identity=37.5 coverage=98.49849849849849)
hypothetical protein
hypothetical protein
seg (db=Seg db_id=seg from=573 to=585)
MEL_B1_7_67
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(73935..75473)
DNA (1539bp) protein (513aa)
phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (EC:5.4.2.1)
phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Clostridium tetani E88 RepID=GPMI_CLOTE (db=UNIREF evalue=0.0 bit_score=565.0 identity=54.5 coverage=98.44054580896686)
Cofactor-independent phosphoglycerate mutase (db=HMMPIR db_id=PIRSF001492 from=1 to=512 evalue=3.1e-284 interpro_id=IPR005995 interpro_description=Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO=Molecular Function: phosphoglycerate mutase activity (GO:0004619), Biological Process: glucose catabolic process (GO:0006007))
MEL_B1_7_68
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

75783..77609
DNA (1827bp) protein (609aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=567 to=589)
seg (db=Seg db_id=seg from=570 to=603)
seg (db=Seg db_id=seg from=534 to=553)
seg (db=Seg db_id=seg from=67 to=85)
MEL_B1_7_69
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

77722..79362
DNA (1641bp) protein (547aa)
glycosyl transferase family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=426 to=445)
transmembrane_regions (db=TMHMM db_id=tmhmm from=399 to=421)
transmembrane_regions (db=TMHMM db_id=tmhmm from=365 to=384)
MEL_B1_7_70
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

79403..82930
DNA (3528bp) protein (1176aa)
dnaE; DNA polymerase III DnaE (EC:2.7.7.7)
dnaE; DNA polymerase III DnaE (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D017_PELTS (db=UNIREF evalue=0.0 bit_score=1025.0 identity=45.1 coverage=96.00340136054422)
seg (db=Seg db_id=seg from=997 to=1006)
MEL_B1_7_71
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(82980..83765)
DNA (786bp) protein (262aa)
seg (db=Seg db_id=seg from=197 to=219)
seg (db=Seg db_id=seg from=166 to=188)
coiled-coil (db=Coil db_id=coil from=226 to=247 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:CCZ50070.1}; TaxID=1262690 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" sou
MEL_B1_7_72
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

83911..84909
DNA (999bp) protein (333aa)
seg (db=Seg db_id=seg from=301 to=321)
SMC domain protein {ECO:0000313|EMBL:CCZ50069.1}; TaxID=1262690 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="
MEL_B1_7_73
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

85119..85661
DNA (543bp) protein (181aa)
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase (db=HMMTigr db_id=TIGR01221 from=4 to=180 evalue=1.3e-102 interpro_id=IPR000888 interpro_description=dTDP-4-dehydrorhamnose 3,5-epimerase-related GO=Molecular Function: dTDP-4-dehydrorhamnose 3,5-epimerase activity (GO:0008830), Biological Process: lipopolysaccharide biosynthetic process (GO:0009103))
RmlC-like cupins (db=superfamily db_id=SSF51182 from=3 to=179 evalue=3.1e-77 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
no description (db=Gene3D db_id=G3DSA:2.60.120.10 from=3 to=179 evalue=2.2e-72 interpro_id=IPR014710 interpro_description=RmlC-like jelly roll fold)
MEL_B1_7_74
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

85658..86635
DNA (978bp) protein (326aa)
hypothetical protein LaniK3_08908 n=1 Tax=Lactobacillus animalis KCTC 3501 RepID=UPI000219409A (db=UNIREF evalue=0.0 bit_score=481.0 identity=68.6 coverage=97.85276073619632)
dTDP-D-glucose 4,6-dehydratase, RfbB (EC:4.2.1.46)
dTDP-D-glucose 4,6-dehydratase, RfbB (EC:4.2.1.46)
dTDP_gluc_dehyt: dTDP-glucose 4,6-deh (db=HMMTigr db_id=TIGR01181 from=2 to=318 evalue=8.4e-215 interpro_id=IPR005888 interpro_description=dTDP-glucose 4,6-dehydratase GO=Molecular Function: dTDP-glucose 4,6-dehydratase activity (GO:0008460), Biological Process: nucleotide-sugar metabolic process (GO:0009225))
MEL_B1_7_75
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

86638..87459
DNA (822bp) protein (274aa)
dTDP-4-dehydrorhamnose reductase
rmlD: dTDP-4-dehydrorhamnose reductase (db=HMMTigr db_id=TIGR01214 from=2 to=270 evalue=1.6e-104 interpro_id=IPR005913 interpro_description=dTDP-4-dehydrorhamnose reductase GO=Molecular Function: dTDP-4-dehydrorhamnose reductase activity (GO:0008831), Biological Process: extracellular polysaccharide biosynthetic process (GO:0045226))
(db=HMMPfam db_id=PF04321 from=1 to=265 evalue=2.7e-103 interpro_id=IPR005913 interpro_description=dTDP-4-dehydrorhamnose reductase GO=Molecular Function: dTDP-4-dehydrorhamnose reductase activity (GO:0008831), Biological Process: extracellular polysaccharide biosynthetic process (GO:0045226))
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=271 evalue=3.5e-99)
MEL_B1_7_76
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

87456..88322
DNA (867bp) protein (289aa)
glucose-1-phosphate thymidylyltransferase
glucose-1-phosphate thymidylyltransferase
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Halomonas boliviensis LC1 RepID=G9EBH9_9GAMM (db=UNIREF evalue=0.0 bit_score=423.0 identity=71.8 coverage=98.26989619377161)
rmlA: glucose-1-phosphate thymidylyltransfer (db=HMMTigr db_id=TIGR01207 from=2 to=288 evalue=2.7e-170 interpro_id=IPR005907 interpro_description=Glucose-1-phosphate thymidylyltransferase, short form GO=Molecular Function: glucose-1-phosphate thymidylyltransferase activity (GO:0008879), Biological Process: extracellular polysaccharide biosynthetic process (GO:0045226))
MEL_B1_7_77
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

88327..89445
DNA (1119bp) protein (373aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CNP8_DESK7 (db=UNIREF evalue=0.0 bit_score=369.0 identity=51.8 coverage=98.39142091152814)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (db=HMMPIR db_id=PIRSF006205 from=2 to=371 evalue=2.4e-193 interpro_id=IPR003821 interpro_description=1-deoxy-D-xylulose 5-phosphate reductoisomerase GO=Biological Process: isoprenoid biosynthetic process (GO:0008299), Molecular Function: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity (GO:0030604), Molecular Function: metal ion binding (GO:0046872), Biological Process: oxidation-reduction process (GO:0055114))
MEL_B1_7_78
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(89428..89700)
DNA (273bp) protein (91aa)
coiled-coil (db=Coil db_id=coil from=38 to=84 evalue=NA)
(db=HMMPfam db_id=PF07195 from=11 to=82 evalue=4.0e-11 interpro_id=IPR010809 interpro_description=Flagellar hook-associated 2, C-terminal GO=Biological Process: cell adhesion (GO:0007155), Cellular Component: bacterial-type flagellum (GO:0009288))
Flagellar hook-associated protein 2 {ECO:0000313|EMBL:CCZ50608.1}; TaxID=1262690 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental sa
Displaying items 61-78 of 78 in total

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