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MEL_B1_7_73

Organism: MEL.B1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 0 / 38
Location: 85119..85661

Top 3 Functional Annotations

Value Algorithm Source
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 179.0
  • Bit_score: 245
  • Evalue 1.20e-62
rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase (db=HMMTigr db_id=TIGR01221 from=4 to=180 evalue=1.3e-102 interpro_id=IPR000888 interpro_description=dTDP-4-dehydrorhamnose 3,5-epimerase-related GO=Molecular Function: dTDP-4-dehydrorhamnose 3,5-epimerase activity (GO:0008830), Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.30e-102
RmlC-like cupins (db=superfamily db_id=SSF51182 from=3 to=179 evalue=3.1e-77 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.10e-77

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Taxonomy

Acinetobacter sp. CAG:196 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGCCGTTTGAATTTGAAAAACAAAAAATTGAGGATGTAATACTGGTTAAACCAAAAGTTTTTGGTGACAACCGCGGTTTTTTTATGGAATCTTATAAAAAATCTGATTTTTATGACAATGGTATTGCTGTAGAATTTAATCAAGATAACCATTCAAAATCAGTAAAAGGCGTTTTAAGAGGACTGCATTATCAGAAAGCACCTTATGGACAGGCAAAACTTGTAAGATGCGGCAGAGGCCGTATCTATGATGTTGCTGTTGATATTAGAAAAGATTCTAAAACATTTGGAGAATATGTTAAGGTCGAACTTTCGGAAGAAAATAAGCACATGCTCTATATACCGGAAGGCTTTGCACATGGTTTTGTTGTTCTTTCAGAAGAAGCCGAACTTTTGTATAAAGCTAGCGGGGAATATGCTCCTCAGGCTGATAGAGGGGTATTGTGGTGTGATAAAGATATAAATATTGATTGGGGAATAGATTTTGACCCGATATTATCTGAAAAAGACCAGAAACAACCTACATTAAAGGAGATTTTATGA
PROTEIN sequence
Length: 181
MPFEFEKQKIEDVILVKPKVFGDNRGFFMESYKKSDFYDNGIAVEFNQDNHSKSVKGVLRGLHYQKAPYGQAKLVRCGRGRIYDVAVDIRKDSKTFGEYVKVELSEENKHMLYIPEGFAHGFVVLSEEAELLYKASGEYAPQADRGVLWCDKDINIDWGIDFDPILSEKDQKQPTLKEIL*