name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
MEL_B2_5_61
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(58219..58599)
|
58219..58599 - ( gc_cont=0.328)
Uncharacterized protein {ECO:0000313|EMBL:CDC21716.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_5_62
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(58739..58939)
|
(db=HMMPfam db_id=PF00196 from=2 to=57 evalue=1.8e-11 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
C-terminal effector domain of the bipartite response regulators (db=superfamily db_id=SSF46894 from=1 to=58 evalue=2.3e-07 interpro_id=IPR016032 interpro_description=Signal transduction response regulator, C-terminal effector GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process: reg
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=65 evalue=0.0001 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
no description (db=HMMSmart db_id=SM00421 from=3 to=57 evalue=0.00051 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
|
|
MEL_B2_5_63
unknown
|
Not on your lists |
comp(59002..59202)
|
seg (db=Seg db_id=seg from=10 to=17)
|
|
MEL_B2_5_64
unknown
|
Not on your lists |
comp(59202..59642)
|
coiled-coil (db=Coil db_id=coil from=48 to=69 evalue=NA)
coiled-coil (db=Coil db_id=coil from=80 to=115 evalue=NA)
|
|
MEL_B2_5_65
unknown
|
Not on your lists |
comp(59632..59817)
|
59632..59817 - ( gc_cont=0.371)
|
|
MEL_B2_5_66
unknown
|
Not on your lists |
comp(59838..59930)
|
seg (db=Seg db_id=seg from=3 to=11)
|
|
MEL_B2_5_67
unknown
|
Not on your lists |
comp(59930..60208)
|
59930..60208 - ( gc_cont=0.355)
|
|
MEL_B2_5_68
unknown
|
Not on your lists |
comp(60208..60414)
|
60208..60414 - ( gc_cont=0.362)
|
|
MEL_B2_5_69
unknown
|
Not on your lists |
comp(60401..60889)
|
60401..60889 - ( gc_cont=0.364)
|
|
MEL_B2_5_70
unknown
|
Not on your lists |
comp(60882..61169)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
|
|
MEL_B2_5_71
unknown
|
Not on your lists |
comp(61162..61551)
|
61162..61551 - ( gc_cont=0.359)
|
|
MEL_B2_5_72
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(61553..62185)
|
seg (db=Seg db_id=seg from=50 to=64)
seg (db=Seg db_id=seg from=2 to=15)
coiled-coil (db=Coil db_id=coil from=44 to=79 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:CCZ83667.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococ
|
|
MEL_B2_5_73
Clostridium sp. CAG:768, Melainabacteria, Bacteria
|
Not on your lists |
comp(62127..62852)
|
Prophage LambdaBa04, DNA replication protein DnaC
Prophage LambdaBa04, DNA replication protein DnaC, putative n=32 Tax=root RepID=Q81Z35_BACAN (db=UNIREF evalue=3.9e-24 bit_score=117.0 identity=35.0 coverage=96.28099173553719)
coiled-coil (db=Coil db_id=coil from=38 to=59 evalue=NA)
seg (db=Seg db_id=seg from=39 to=52)
|
|
MEL_B2_5_74
GWB1_OP11_49_7, Gottesmanbacteria, Microgenomates, Bacteria
|
Not on your lists |
comp(62840..63547)
|
phage protein
Phage protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLJ9_ALKMQ (db=UNIREF evalue=6.3e-27 bit_score=127.0 identity=36.8 coverage=64.40677966101694)
seg (db=Seg db_id=seg from=108 to=144)
coiled-coil (db=Coil db_id=coil from=174 to=195 evalue=NA)
|
|
MEL_B2_5_75
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(63544..63762)
|
63544..63762 - ( gc_cont=0.384)
Uncharacterized protein {ECO:0000313|EMBL:CDC21702.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_5_76
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(63860..64639)
|
hypothetical protein
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=A5N2F4_CLOK5
Uncharacterized protein {ECO:0000313|EMBL:BAH07964.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 1
|
|
MEL_B2_5_77
Thermosipho melanesiensis, Thermosipho, Thermotogales, Thermotogae, Thermotogae, Bacteria
|
Not on your lists |
comp(64639..65532)
|
Phage-related protein predicted endonuclease-like protein n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LN19_THEM4 (db=UNIREF evalue=0.0 bit_score=213.0 identity=37.2 coverage=97.6510067114094)
Phage-like protein endonuclease-like protein
coiled-coil (db=Coil db_id=coil from=215 to=243 evalue=NA)
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=5 to=190 evalue=2.3e-29 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like)
|
|
MEL_B2_5_78
unknown
|
Not on your lists |
comp(65532..65723)
|
65532..65723 - ( gc_cont=0.354)
|
|
MEL_B2_5_79
unknown
|
Not on your lists |
comp(65857..66087)
|
seg (db=Seg db_id=seg from=30 to=38)
|
|
MEL_B2_5_80
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(66335..66484)
|
66335..66484 - ( gc_cont=0.313)
Uncharacterized protein {ECO:0000313|EMBL:CDC21694.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_5_81
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
66583..67134
|
phage repressor
Putative phage repressor n=1 Tax=Brachyspira intermedia PWS/A RepID=G0EP36_BRAIP (db=UNIREF evalue=1.9e-10 bit_score=72.0 identity=31.2 coverage=63.58695652173913)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=66 evalue=5.1e-13 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=1 to=64 evalue=1.4e-10 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
|
|
MEL_B2_5_82
unknown
|
Not on your lists |
67131..67598
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=85 to=104)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
|
|
MEL_B2_5_83
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(67868..68197)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=39)
Uncharacterized protein {ECO:0000313|EMBL:CDC21690.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_5_84
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria
|
Not on your lists |
68393..69976
|
DNA recombinase
coiled-coil (db=Coil db_id=coil from=351 to=376 evalue=NA)
coiled-coil (db=Coil db_id=coil from=387 to=408 evalue=NA)
coiled-coil (db=Coil db_id=coil from=429 to=450 evalue=NA)
|
|
MEL_B2_5_85
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(70085..70804)
|
peptidase M48
seg (db=Seg db_id=seg from=154 to=163)
seg (db=Seg db_id=seg from=195 to=214)
OMA1 HOMOLOG, ZINC METALLOPEPTIDASE (db=HMMPanther db_id=PTHR22726 from=10 to=159 evalue=1.5e-26)
|
|
MEL_B2_5_86
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
71050..71361
|
seg (db=Seg db_id=seg from=13 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:CDC21901.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_5_87
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
71392..71751
|
seg (db=Seg db_id=seg from=29 to=41)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=83 to=105)
coiled-coil (db=Coil db_id=coil from=56 to=77 evalue=NA)
|
|
MEL_B2_5_88
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
71884..72147
|
general stress protein
coiled-coil (db=Coil db_id=coil from=33 to=61 evalue=NA)
seg (db=Seg db_id=seg from=7 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
|
|
MEL_B2_5_89
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(72224..74251)
|
seg (db=Seg db_id=seg from=578 to=592)
Uncharacterized protein {ECO:0000313|EMBL:CDC21898.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
|
|
MEL_B2_5_90
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(74311..75699)
|
Putative uncharacterized protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A8S4_CARHZ (db=UNIREF evalue=0.0 bit_score=551.0 identity=59.5 coverage=98.27213822894169)
hypothetical protein
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
|