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MEL_B2_6

Search features with annotation key words

Displaying items 61-73 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MEL_B2_6_61
Coprothermobacter proteolyticus, Coprothermobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(59118..59918)
DNA (801bp) protein (267aa)
carboxyl-protease
Carboxyl-protease n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y942_COPPD (db=UNIREF evalue=1.5e-08 bit_score=66.0 identity=29.2 coverage=40.44943820224719)
seg (db=Seg db_id=seg from=224 to=262)
seg (db=Seg db_id=seg from=205 to=220)
MEL_B2_6_62
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(60120..60815)
DNA (696bp) protein (232aa)
Transcriptional regulator
Transcriptional regulator n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D938_LARHH (db=UNIREF evalue=6.2e-27 bit_score=127.0 identity=29.7 coverage=94.39655172413794)
LexA/Signal peptidase (db=superfamily db_id=SSF51306 from=93 to=228 evalue=1.1e-26 interpro_id=IPR015927 interpro_description=Peptidase S24/S26A/S26B/S26C)
(db=HMMPfam db_id=PF00717 from=144 to=210 evalue=2.9e-12 interpro_id=IPR019759 interpro_description=Peptidase S24/S26A/S26B)
MEL_B2_6_63
unknown

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61064..61252
DNA (189bp) protein (63aa)
(db=HMMPfam db_id=PF01381 from=9 to=39 evalue=5.1e-06 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
MEL_B2_6_64
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

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61252..63174
DNA (1923bp) protein (641aa)
Putative uncharacterized protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QTK9_CHLT3 (db=UNIREF evalue=0.0 bit_score=385.0 identity=34.1 coverage=99.06396255850234)
hypothetical protein
hypothetical protein
seg (db=Seg db_id=seg from=539 to=560)
MEL_B2_6_65
Caldithrix abyssi, Caldithrix, Bacteria

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63184..64062
DNA (879bp) protein (293aa)
Transcriptional regulator, XRE family n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XTG2_9BACT (db=UNIREF evalue=0.0 bit_score=309.0 identity=51.7 coverage=98.63481228668942)
transposase
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=87 to=278 evalue=3.2e-12)
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EHO40395.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
MEL_B2_6_66
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

64069..64212
DNA (144bp) protein (48aa)
seg (db=Seg db_id=seg from=10 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
Uncharacterized protein {ECO:0000313|EMBL:CDE97543.1}; TaxID=1262843 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
MEL_B2_6_67
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

64190..64627
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XTF4_9BACT (db=UNIREF evalue=5.3e-08 bit_score=63.0 identity=28.2 coverage=84.93150684931507)
(db=HMMPfam db_id=PF06252 from=19 to=136 evalue=3.3e-18 interpro_id=IPR009363 interpro_description=Bacteriophage Mu, Gp16)
Uncharacterized protein {ECO:0000313|EMBL:CDE97542.1}; TaxID=1262843 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
MEL_B2_6_68
unknown

Not on your lists

64667..64927
DNA (261bp) protein (87aa)
coiled-coil (db=Coil db_id=coil from=5 to=26 evalue=NA)
MEL_B2_6_69
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

65017..65307
DNA (291bp) protein (97aa)
65017..65307 + ( gc_cont=0.320)
Uncharacterized protein {ECO:0000313|EMBL:CDE97540.1}; TaxID=1262843 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
MEL_B2_6_70
unknown

Not on your lists

comp(65368..65649)
DNA (282bp) protein (94aa)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=10 to=78 evalue=1.1e-08 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=16 to=78 evalue=3.0e-08 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00530 from=19 to=75 evalue=1.6e-05 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
(db=HMMPfam db_id=PF01381 from=20 to=75 evalue=0.00015 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
MEL_B2_6_71
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

65759..66208
DNA (450bp) protein (150aa)
hypothetical protein
seg (db=Seg db_id=seg from=4 to=15)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
Uncharacterized protein {ECO:0000313|EMBL:CDE42437.1}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
MEL_B2_6_72
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(66209..66634)
DNA (426bp) protein (142aa)
seg (db=Seg db_id=seg from=6 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
Uncharacterized protein {ECO:0000313|EMBL:CDE43295.1}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
MEL_B2_6_73
unknown

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comp(66582..66800)
DNA (219bp) protein (73aa)
seg (db=Seg db_id=seg from=61 to=72)
seg (db=Seg db_id=seg from=34 to=56)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
Displaying items 61-73 of 73 in total

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