ggKbase home page

MEL_B2_11_5

Organism: MEL.B2

near complete RP 53 / 55 MC: 14 BSCG 50 / 51 ASCG 0 / 38
Location: 3795..4337

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
Pili subunits (db=superfamily db_id=SSF54523 from=7 to=98 evalue=1.5e-12) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.50e-12
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=4 to=27 evalue=2.0e-06 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.00e-06

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:306 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGAACAAAAAATCAGGTTTTACTTTAGCGGAAGTTTTAGTTACATTGATGATTATCGGTGTAATCGCAGCTATGACAATTCCTTCATTGATGCAATCTACCGCTCAACAAGAATTTAGAGCTGCTTACAAAAAAGCAACTTCTATGATCAACCAGGCAGTTACTTTGAACTACGCGTTAGACGGTAGAGATGCTACTGACTATAACGGTACAGCATTCTTTGACCTGTTGACACAAAGATTAAACGTTATGTCTTCTGACCAAACTAACACTGAACTTTATACTGCTGACGGTATGTGGTTCAAAACTTATGCAGAACAAAGAGGCGCAATGGGTATACCTACTGCAAATTGTAATGCTAACGACCAAGCAACAGAAGACAACATTTGTTCAGTTGTTGAAGTTGACGTTAACGGTATGAAAGGTCCTAACAGATACACTACTTCTACAACAAGAATCTTTGACCTTTTCACAATCGCTATTTACCCTCAAAAAGCATTACCTGCTAACGAAACAATGGGTATGATTTTGTACCAAAAATAG
PROTEIN sequence
Length: 181
MNKKSGFTLAEVLVTLMIIGVIAAMTIPSLMQSTAQQEFRAAYKKATSMINQAVTLNYALDGRDATDYNGTAFFDLLTQRLNVMSSDQTNTELYTADGMWFKTYAEQRGAMGIPTANCNANDQATEDNICSVVEVDVNGMKGPNRYTTSTTRIFDLFTIAIYPQKALPANETMGMILYQK*