name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
MEL_B2_11_1
Vibrio sp. C7, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(3..341)
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branched-chain alpha-keto acid dehydrogenase subunit E2
Phase 1 flagellin (db=superfamily db_id=SSF64518 from=1 to=113 evalue=7.3e-31)
(db=HMMPfam db_id=PF00669 from=4 to=112 evalue=4.6e-23 interpro_id=IPR001029 interpro_description=Flagellin, D0/D1 domain GO=Biological Process: ciliary or flagellar motility (GO:0001539), Molecular Function: structural molecule activity (GO:0005198), Cellular Component: bacterial-type flagellum (GO:0009288))
no description (db=Gene3D db_id=G3DSA:1.20.1330.10 from=53 to=113 evalue=1.2e-15)
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MEL_B2_11_2
Clostridium sp. CAG:306, Melainabacteria, Bacteria
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Not on your lists |
comp(566..841)
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rpsO; 30S ribosomal protein S15
seg (db=Seg db_id=seg from=2 to=16)
RIBOSOMAL_S15 (db=PatternScan db_id=PS00362 from=41 to=71 evalue=0.0 interpro_id=IPR000589 interpro_description=Ribosomal protein S15 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
S15_bact: ribosomal protein S15 (db=HMMTigr db_id=TIGR00952 from=6 to=91 evalue=2.0e-48 interpro_id=IPR005290 interpro_description=Ribosomal protein S15, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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MEL_B2_11_3
Clostridium sp. CAG:768, Melainabacteria, Bacteria
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Not on your lists |
1044..1751
|
thymidylate synthase, flavin-dependent (EC:2.1.1.148)
thyX: thymidylate synthase, flavin-dependent (db=HMMTigr db_id=TIGR02170 from=7 to=206 evalue=5.6e-56 interpro_id=IPR003669 interpro_description=Thymidylate synthase ThyX GO=Biological Process: dTMP biosynthetic process (GO:0006231), Molecular Function: flavin adenine dinucleotide binding (GO:0050660), Molecular Function: thymidylate synthase (FAD) activity (GO:0050797))
(db=HMMPfam db_id=PF02511 from=8 to=201 evalue=6.9e-55 interpro_id=IPR003669 interpro_description=Thymidylate synthase ThyX GO=Biological Process: dTMP biosynthetic process (GO:0006231), Molecular Function: flavin adenine dinucleotide binding (GO:0050660), Molecular Function: thymidylate synthase (FAD) activity (GO:0050797))
Thymidylate synthase-complementing protein Thy1 (db=superfamily db_id=SSF69796 from=6 to=211 evalue=3.6e-52 interpro_id=IPR003669 interpro_description=Thymidylate synthase ThyX GO=Biological Process: dTMP biosynthetic process (GO:0006231), Molecular Function: flavin adenine dinucleotide binding (GO:0050660), Molecular Function: thymidylate synthase (FAD) activity (GO:0050797))
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MEL_B2_11_4
Clostridium sp. CAG:306, Melainabacteria, Bacteria
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Not on your lists |
comp(1762..3615)
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tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZDY6_NODSP (db=UNIREF evalue=0.0 bit_score=699.0 identity=56.9 coverage=99.02912621359224)
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
seg (db=Seg db_id=seg from=24 to=36)
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MEL_B2_11_5
Clostridium sp. CAG:306, Melainabacteria, Bacteria
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Not on your lists |
3795..4337
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Pili subunits (db=superfamily db_id=SSF54523 from=7 to=98 evalue=1.5e-12)
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MEL_B2_11_6
Clostridium sp. CAG:306, Melainabacteria, Bacteria
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Not on your lists |
comp(4406..5374)
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glycosyl transferase family protein
seg (db=Seg db_id=seg from=167 to=178)
seg (db=Seg db_id=seg from=188 to=201)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=2 to=322 evalue=1.8e-50)
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MEL_B2_11_7
Clostridium sp. CAG:306, Melainabacteria, Bacteria
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Not on your lists |
comp(5436..5783)
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coiled-coil (db=Coil db_id=coil from=27 to=48 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:CDC20345.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
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MEL_B2_11_8
Clostridium sp. CAG:306, Melainabacteria, Bacteria
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Not on your lists |
comp(5848..7032)
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hypothetical protein
seg (db=Seg db_id=seg from=273 to=283)
seg (db=Seg db_id=seg from=74 to=90)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
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MEL_B2_11_9
Clostridium sp. CAG:306, Melainabacteria, Bacteria
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Not on your lists |
comp(7037..7882)
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Bifunctional protein FolD 2 n=1 Tax=Bacillus sp. SG-1 RepID=A6CNG0_9BACI (db=UNIREF evalue=0.0 bit_score=312.0 identity=56.0 coverage=95.39007092198581)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5)
THF_DHG_CYH_2 (db=PatternScan db_id=PS00767 from=256 to=264 evalue=0.0 interpro_id=IPR020867 interpro_description=Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: folic acid-containing compound biosynthetic process (GO:0009396), Biological Process: oxidation-reduction process (GO:0055114))
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MEL_B2_11_10
Clostridium sp. CAG:306, Melainabacteria, Bacteria
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Not on your lists |
comp(7892..8644)
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Cobyrinic acid ac-diamide synthase
seg (db=Seg db_id=seg from=86 to=101)
seg (db=Seg db_id=seg from=7 to=20)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=222 evalue=1.0e-25)
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MEL_B2_11_11
Clostridium sp. CAG:306, Melainabacteria, Bacteria
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Not on your lists |
comp(8644..9732)
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Methionine synthase vitamin-B12 independent
seg (db=Seg db_id=seg from=204 to=215)
coiled-coil (db=Coil db_id=coil from=291 to=312 evalue=NA)
UROD/MetE-like (db=superfamily db_id=SSF51726 from=1 to=358 evalue=2.4e-18)
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MEL_B2_11_12
Clostridium sp. CAG:306, Melainabacteria, Bacteria
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Not on your lists |
10491..11201
|
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family n=6 Tax=Clostridium thermocellum RepID=C7HF94_CLOTM (db=UNIREF evalue=3.8e-40 bit_score=171.0 identity=41.0 coverage=86.91983122362869)
seg (db=Seg db_id=seg from=38 to=48)
HTH_LUXR_1 (db=PatternScan db_id=PS00622 from=181 to=208 evalue=0.0 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
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MEL_B2_11_13
Clostridium sp. CAG:306, Melainabacteria, Bacteria
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Not on your lists |
11233..12507
|
integral membrane sensor signal transduction histidine kinase
Histidine kinase n=1 Tax=Treponema azotonutricium ZAS-9 RepID=F5YFW3_TREAZ (db=UNIREF evalue=3.0e-19 bit_score=102.0 identity=25.5 coverage=78.58823529411765)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (db=superfamily db_id=SSF55874 from=270 to=422 evalue=2.6e-30 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
TWO COMPONENT HISTIDINE KINASE (SPORULATION KINASE) (db=HMMPanther db_id=PTHR23283:SF24 from=135 to=423 evalue=6.9e-25)
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MEL_B2_11_14
Clostridium sp. CAG:306, Melainabacteria, Bacteria
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Not on your lists |
12521..13027
|
seg (db=Seg db_id=seg from=124 to=134)
Flagellar basal body rod protein FlgB {ECO:0000313|EMBL:CDC20363.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" sourc
flagellar basal-body rod protein FlgB
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MEL_B2_11_15
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
13031..13537
|
flagellar basal-body rod protein FlgC
seg (db=Seg db_id=seg from=133 to=142)
FlgC: flagellar basal-body rod protein FlgC (db=HMMTigr db_id=TIGR01395 from=3 to=168 evalue=1.4e-47 interpro_id=IPR006299 interpro_description=Flagellar basal-body rod protein FlgC GO=Cellular Component: flagellum (GO:0019861))
(db=HMMPfam db_id=PF06429 from=130 to=168 evalue=8.5e-13 interpro_id=IPR010930 interpro_description=Domain of unknown function DUF1078, C-terminal GO=Cellular Component: flagellum (GO:0019861))
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MEL_B2_11_16
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
13551..14081
|
flagellar hook-basal body complex protein (FliE)
(db=HMMPfam db_id=PF02049 from=83 to=175 evalue=2.8e-24 interpro_id=IPR001624 interpro_description=Flagellar hook-basal body complex protein FliE GO=Biological Process: ciliary or flagellar motility (GO:0001539), Molecular Function: motor activity (GO:0003774), Molecular Function: structural molecule activity (GO:0005198), Cellular Component: bacterial-type flagellum (GO:0009288))
fliE: flagellar hook-basal body complex prot (db=HMMTigr db_id=TIGR00205 from=72 to=176 evalue=1.5e-16 interpro_id=IPR001624 interpro_description=Flagellar hook-basal body complex protein FliE GO=Biological Process: ciliary or flagellar motility (GO:0001539), Molecular Function: motor activity (GO:0003774), Molecular Function: structural molecule activity (GO:0005198), Cellular Component: bacterial-type flagellum (GO:0009288))
FLGHOOKFLIE (db=FPrintScan db_id=PR01006 from=106 to=122 evalue=1.7e-11 interpro_id=IPR001624 interpro_description=Flagellar hook-basal body complex protein FliE GO=Biological Process: ciliary or flagellar motility (GO:0001539), Molecular Function: motor activity (GO:0003774), Molecular Function: structural molecule activity (GO:0005198), Cellular Component: bacterial-type flagellum (GO:0009288))
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MEL_B2_11_17
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
14599..15003
|
bacterial translation initiation factor 3 (bIF-3)
seg (db=Seg db_id=seg from=28 to=43)
IF3 (db=PatternScan db_id=PS00938 from=22 to=35 evalue=0.0 interpro_id=IPR019813 interpro_description=Translation initiation factor 3, conserved site GO=Molecular Function: translation initiation factor activity (GO:0003743), Biological Process: translational initiation (GO:0006413))
TRANSLATION INITIATION FACTOR IF-3 (db=HMMPanther db_id=PTHR10938 from=1 to=134 evalue=6.6e-39 interpro_id=IPR001288 interpro_description=Translation initiation factor 3 GO=Molecular Function: translation initiation factor activity (GO:0003743), Biological Process: translational initiation (GO:0006413))
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MEL_B2_11_18
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
15017..15238
|
hypothetical protein
Helix-turn-helix domain protein n=1 Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GLT5_BACCN (db=UNIREF evalue=3.5e-08 bit_score=63.0 identity=45.5 coverage=87.83783783783784)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=69 evalue=3.7e-16 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=10 to=72 evalue=3.2e-15 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
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MEL_B2_11_19
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(15241..15900)
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metal-dependent phosphoesterase
PHP domain-like (db=superfamily db_id=SSF89550 from=24 to=213 evalue=3.0e-35 interpro_id=IPR016195 interpro_description=Polymerase/histidinol phosphatase-like GO=Molecular Function: catalytic activity (GO:0003824))
(db=HMMPfam db_id=PF02811 from=24 to=156 evalue=1.5e-14 interpro_id=IPR004013 interpro_description=PHP, C-terminal GO=Molecular Function: catalytic activity (GO:0003824))
no description (db=HMMSmart db_id=SM00481 from=24 to=88 evalue=3.4e-13 interpro_id=IPR003141 interpro_description=Polymerase/histidinol phosphatase, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260))
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MEL_B2_11_20
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
15961..16950
|
seg (db=Seg db_id=seg from=311 to=322)
seg (db=Seg db_id=seg from=194 to=211)
seg (db=Seg db_id=seg from=159 to=170)
seg (db=Seg db_id=seg from=97 to=111)
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MEL_B2_11_21
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
16950..17165
|
16950..17165 + ( gc_cont=0.352)
Uncharacterized protein {ECO:0000313|EMBL:CDC20383.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
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MEL_B2_11_22
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(17172..17564)
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cytidine deaminase (EC:3.5.4.5)
CYT_DCMP_DEAMINASES (db=PatternScan db_id=PS00903 from=54 to=95 evalue=0.0 interpro_id=IPR016192 interpro_description=APOBEC/CMP deaminase, zinc-binding GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity (GO:0016787))
cyt_deam_tetra: cytidine deaminase (db=HMMTigr db_id=TIGR01354 from=5 to=130 evalue=1.2e-48 interpro_id=IPR006262 interpro_description=Cytidine deaminase, homotetrameric GO=Molecular Function: cytidine deaminase activity (GO:0004126), Biological Process: cytidine deamination (GO:0009972))
CYTIDINE DEAMINASE (db=HMMPanther db_id=PTHR11644:SF2 from=10 to=128 evalue=5.3e-44)
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MEL_B2_11_23
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
17779..19149
|
seg (db=Seg db_id=seg from=419 to=432)
seg (db=Seg db_id=seg from=348 to=377)
seg (db=Seg db_id=seg from=316 to=330)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
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MEL_B2_11_24
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
19247..20584
|
UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=MURA2_CARHZ (db=UNIREF evalue=0.0 bit_score=427.0 identity=52.6 coverage=93.49775784753363)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
murA: UDP-N-acetylglucosamine 1-carboxyvinyl (db=HMMTigr db_id=TIGR01072 from=2 to=420 evalue=7.6e-222 interpro_id=IPR005750 interpro_description=UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO=Molecular Function: transferase activity (GO:0016740), Biological Process: UDP-N-acetylgalactosamine biosynthetic process (GO:0019277))
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MEL_B2_11_25
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
20571..20897
|
20571..20897 + ( gc_cont=0.379)
Uncharacterized protein {ECO:0000313|EMBL:CDC20391.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
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MEL_B2_11_26
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
20924..22177
|
pepT; peptidase T (EC:3.4.11.-)
ARGE_DAPE_CPG2_1 (db=PatternScan db_id=PS00758 from=72 to=81 evalue=0.0 interpro_id=IPR001261 interpro_description=ArgE/DapE/ACY1/CPG2/YscS, conserved site GO=Biological Process: proteolysis (GO:0006508), Molecular Function: metallopeptidase activity (GO:0008237))
Zn-dependent exopeptidases (db=superfamily db_id=SSF53187 from=12 to=415 evalue=3.2e-42)
no description (db=Gene3D db_id=G3DSA:3.40.630.10 from=10 to=412 evalue=1.3e-41)
|
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MEL_B2_11_27
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(22179..23192)
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Phosphate transporter n=1 Tax=Desulfobulbus propionicus DSM 2032 RepID=E8RIT1_DESPD (db=UNIREF evalue=0.0 bit_score=416.0 identity=60.9 coverage=94.37869822485207)
phosphate transporter
phosphate transporter
transmembrane_regions (db=TMHMM db_id=tmhmm from=140 to=162)
|
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MEL_B2_11_28
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(23216..23857)
|
hypothetical protein
(db=HMMPfam db_id=PF01865 from=15 to=206 evalue=8.3e-09 interpro_id=IPR018445 interpro_description=Putitive phosphate transport regulator)
Uncharacterized protein {ECO:0000313|EMBL:CDC20399.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
putative phosphate transport regulator; K07220 hypothetical protein alias=ACD20_522.8485.14G0005,ACD20_522.8485.14_5,ACD20_C00134G00005 id=20358 tax=ACD20 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
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MEL_B2_11_29
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(23986..25191)
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23986..25191 - ( gc_cont=0.357)
Oxidoreductase short chain dehydrogenase/reductase family {ECO:0000313|EMBL:CDC20401.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmen
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MEL_B2_11_30
Clostridium sp. CAG:306, Melainabacteria, Bacteria
|
Not on your lists |
comp(25254..27020)
|
Proline--tRNA ligase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I8F6_9CLOT (db=UNIREF evalue=0.0 bit_score=641.0 identity=55.2 coverage=95.41595925297113)
proS; prolyl-tRNA synthetase (EC:6.1.1.15)
proS; prolyl-tRNA synthetase (EC:6.1.1.15)
proS_fam_II: prolyl-tRNA synthetase (db=HMMTigr db_id=TIGR00409 from=1 to=582 evalue=1.1e-267 interpro_id=IPR004500 interpro_description=Prolyl-tRNA synthetase, class IIa, bacterial-type GO=Molecular Function: proline-tRNA ligase activity (GO:0004827), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: prolyl-tRNA aminoacylation (GO:0006433))
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