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MEL_B2_11_12 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
41.0 217.0 171 3.60e-40 cth:Cthe_1267
Two component transcriptional regulator, LuxR family n=6 Tax=Clostridium thermocellum RepID=C7HF94_CLOTM (db=UNIREF evalue=3.8e-40 bit_score=171.0 identity=41.0 coverage=86.91983122362869) similarity UNIREF
DB: UNIREF
41.0 86.92 171 3.80e-40 cth:Cthe_1267
seg (db=Seg db_id=seg from=38 to=48) iprscan interpro
DB: Seg
null null null null cth:Cthe_1267
HTH_LUXR_1 (db=PatternScan db_id=PS00622 from=181 to=208 evalue=0.0 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: PatternScan
null null null 0.0 cth:Cthe_1267
CheY-like (db=superfamily db_id=SSF52172 from=8 to=201 evalue=8.6e-33 interpro_id=IPR011006 interpro_description=CheY-like superfamily) iprscan interpro
DB: superfamily
null null null 8.60e-33 cth:Cthe_1267
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=6 to=132 evalue=4.6e-27) iprscan interpro
DB: Gene3D
null null null 4.60e-27 cth:Cthe_1267
(db=HMMPfam db_id=PF00072 from=13 to=124 evalue=1.1e-25 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 1.10e-25 cth:Cthe_1267
no description (db=HMMSmart db_id=SM00448 from=11 to=124 evalue=1.6e-25 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
null null null 1.60e-25 cth:Cthe_1267
no description (db=HMMSmart db_id=SM00421 from=164 to=221 evalue=4.4e-23 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: HMMSmart
null null null 4.40e-23 cth:Cthe_1267
(db=HMMPfam db_id=PF00196 from=165 to=221 evalue=1.1e-19 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: HMMPfam
null null null 1.10e-19 cth:Cthe_1267
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=140 to=227 evalue=1.3e-19 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 1.30e-19 cth:Cthe_1267
HTHLUXR (db=FPrintScan db_id=PR00038 from=181 to=197 evalue=8.3e-14 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: FPrintScan
null null null 8.30e-14 cth:Cthe_1267
HTHLUXR (db=FPrintScan db_id=PR00038 from=197 to=209 evalue=8.3e-14 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: FPrintScan
null null null 8.30e-14 cth:Cthe_1267
HTHLUXR (db=FPrintScan db_id=PR00038 from=167 to=181 evalue=8.3e-14 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: FPrintScan
null null null 8.30e-14 cth:Cthe_1267
SENSOR HISTIDINE KINASE-RELATED (db=HMMPanther db_id=PTHR23283 from=8 to=128 evalue=1.9e-08) iprscan interpro
DB: HMMPanther
null null null 1.90e-08 cth:Cthe_1267
RESPONSE_REGULATORY (db=ProfileScan db_id=PS50110 from=12 to=128 evalue=28.104 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null null null 2.81e+01 cth:Cthe_1267
HTH_LUXR_2 (db=ProfileScan db_id=PS50043 from=160 to=225 evalue=30.282 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: ProfileScan
null null null 3.03e+01 cth:Cthe_1267
Two component transcriptional regulator LuxR family {ECO:0000313|EMBL:CDC20359.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental sa UNIPROT
DB: UniProtKB
99.6 236.0 451 9.00e-124 R6PHQ3_9CLOT