Alias: ACD20_67027.59980.14
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD20_7_31
uncultured bacterium, Bacteria
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Not on your lists |
30646..31278
|
coiled-coil (db=Coil db_id=coil from=151 to=179 evalue=NA)
seg (db=Seg db_id=seg from=145 to=165)
Uncharacterized protein {ECO:0000313|EMBL:EKE02604.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
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ACD20_7_32
uncultured bacterium, Bacteria
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Not on your lists |
31278..31532
|
31278..31532 + (rbs_motif=AGGAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02605.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_7_33
uncultured bacterium, Bacteria
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Not on your lists |
31551..32945
|
restriction endonuclease subunit S
rbh
Type I restriction-modification system specificity subunit S n=1 Tax=Vibrio cholerae 12129(1) RepID=C2C4P1_VIBCH (db=UNIREF evalue=9.0e-67 bit_score=258.0 identity=40.87 coverage=86.0215053763441)
seg (db=Seg db_id=seg from=199 to=213)
coiled-coil (db=Coil db_id=coil from=385 to=413 evalue=NA)
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ACD20_7_34
uncultured bacterium, Bacteria
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Not on your lists |
32956..33468
|
Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=C0DWQ8_EIKCO (db=UNIREF evalue=1.0e-28 bit_score=129.0 identity=36.88 coverage=92.3976608187134)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=82)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
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ACD20_7_35
uncultured bacterium, Bacteria
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Not on your lists |
33470..34348
|
hypothetical protein
hypothetical protein BthaB_30129 n=1 Tax=Burkholderia thailandensis Bt4 RepID=UPI00016A8EDC (db=UNIREF evalue=2.0e-64 bit_score=249.0 identity=42.86 coverage=93.1740614334471)
Nucleotidyltransferase (db=superfamily db_id=SSF81301 from=1 to=151 evalue=5.5e-14)
NTP_transf_2 (db=HMMPfam db_id=PF01909 from=31 to=109 evalue=8.0e-07 interpro_id=IPR002934 interpro_description=Nucleotidyl transferase domain GO=Molecular Function: nucleotidyltransferase activity (GO:0016779))
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ACD20_7_36
uncultured bacterium, Bacteria
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Not on your lists |
34359..37601
|
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=bacterium Ellin514 RepID=B9XT11_9BACT (db=UNIREF evalue=0.0 bit_score=1223.0 identity=56.24 coverage=98.0573543015726)
type I restriction-modification system, R subunit
type I restriction-modification system, R subunit
seg (db=Seg db_id=seg from=778 to=791)
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ACD20_7_37
uncultured bacterium, Bacteria
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Not on your lists |
37601..38329
|
hypothetical protein
Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XT10_9BACT (db=UNIREF evalue=2.0e-58 bit_score=229.0 identity=45.15 coverage=95.4732510288066)
DUF45 (db=HMMPfam db_id=PF01863 from=28 to=238 evalue=8.7e-58 interpro_id=IPR002725 interpro_description=Protein of unknown function DUF45)
Uncharacterized protein {ECO:0000313|EMBL:EKE02610.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_7_38
uncultured bacterium, Bacteria
|
Not on your lists |
38610..39140
|
N-acetyltransferase GCN5
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=134 evalue=2.2e-23 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=1 to=165 evalue=6.4e-14 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
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ACD20_7_39
uncultured bacterium, Bacteria
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Not on your lists |
39458..40573
|
PQQ repeat protein
PQQ repeat protein n=1 Tax=Arthrospira platensis NIES-39 RepID=D5A6C9_SPIPL (db=UNIREF evalue=3.0e-65 bit_score=252.0 identity=40.51 coverage=84.4086021505376)
Quinoprotein alcohol dehydrogenase-like (db=superfamily db_id=SSF50998 from=145 to=371 evalue=1.5e-55 interpro_id=IPR011047 interpro_description=Quinonprotein alcohol dehydrogenase-like)
Quinoprotein alcohol dehydrogenase-like (db=superfamily db_id=SSF50998 from=16 to=180 evalue=1.8e-32 interpro_id=IPR011047 interpro_description=Quinonprotein alcohol dehydrogenase-like)
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Not on cytoplasmic membrane, unlikely acceptor NDH.
These enzymes containing PQQ are called quinoproteins. Glucose dehydrogenase, one of the quinoproteins, is used as a glucose sensor. Subsequently, PQQ was found to stimulate growth in bacteria.[6] In addition, antioxidant and neuro-protective effects were also found.[7]
kelly wrighton
(11/15/12)
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ACD20_7_40
uncultured bacterium, Bacteria
|
Not on your lists |
comp(40779..41087)
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seg (db=Seg db_id=seg from=14 to=28)
Uncharacterized protein {ECO:0000313|EMBL:EKE02613.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_7_41
uncultured bacterium, Bacteria
|
Not on your lists |
comp(41223..41480)
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50S ribosomal protein L27
RIBOSOMAL_L27 (db=PatternScan db_id=PS00831 from=34 to=48 evalue=0.0 interpro_id=IPR018261 interpro_description=Ribosomal protein L27, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L27: ribosomal protein L27 (db=HMMTigr db_id=TIGR00062 from=1 to=82 evalue=4.3e-50 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMAL PROTEIN L27 (db=HMMPanther db_id=PTHR15893 from=8 to=84 evalue=6.9e-46 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD20_7_42
uncultured bacterium, Bacteria
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Not on your lists |
comp(41527..41841)
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50S ribosomal protein L21P
50S ribosomal protein L21 n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PD89_9LACO (db=UNIREF evalue=8.0e-19 bit_score=95.9 identity=53.92 coverage=96.1904761904762)
seg (db=Seg db_id=seg from=75 to=88)
RIBOSOMAL_L21 (db=PatternScan db_id=PS01169 from=72 to=94 evalue=0.0 interpro_id=IPR018258 interpro_description=Ribosomal protein L21, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD20_7_43
uncultured bacterium, Bacteria
|
Not on your lists |
42086..42685
|
cyclase/dehydrase (db=KEGG evalue=1.0e-11 bit_score=72.8 identity=31.64 coverage=82.5)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=10 to=22)
Bet v1-like (db=superfamily db_id=SSF55961 from=58 to=198 evalue=7.2e-18)
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ACD20_7_44
uncultured bacterium, Bacteria
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Not on your lists |
42939..43304
|
CBS domain containing protein
INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED (db=HMMPanther db_id=PTHR11911 from=1 to=102 evalue=5.0e-19)
INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED (db=HMMPanther db_id=PTHR11911:SF5 from=1 to=102 evalue=5.0e-19)
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ACD20_7_45
uncultured bacterium, Bacteria
|
Not on your lists |
43379..43702
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=27)
seg (db=Seg db_id=seg from=32 to=46)
coiled-coil (db=Coil db_id=coil from=84 to=105 evalue=NA)
|
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ACD20_7_46
uncultured bacterium, Bacteria
|
Not on your lists |
43712..44380
|
endonuclease V (EC:3.1.21.-)
seg (db=Seg db_id=seg from=140 to=149)
Endonuclease_5 (db=HMMPfam db_id=PF04493 from=12 to=211 evalue=6.8e-58 interpro_id=IPR007581 interpro_description=Endonuclease V GO=Molecular Function: endonuclease activity (GO:0004519), Biological Process: DNA repair (GO:0006281))
Endonuclease_5 (db=HAMAP db_id=MF_00801 from=4 to=219 evalue=34.164)
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ACD20_7_47
uncultured bacterium, Bacteria
|
Not on your lists |
comp(44737..45003)
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44737..45003 - (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02567.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_7_48
uncultured bacterium, Bacteria
|
Not on your lists |
comp(45074..45523)
|
seg (db=Seg db_id=seg from=62 to=72)
transmembrane_regions (db=TMHMM db_id=tmhmm from=87 to=109)
transmembrane_regions (db=TMHMM db_id=tmhmm from=124 to=143)
Chaperone J-domain (db=superfamily db_id=SSF46565 from=1 to=80 evalue=5.2e-13 interpro_id=IPR001623 interpro_description=Heat shock protein DnaJ, N-terminal GO=Molecular Function: heat shock protein binding (GO:0031072))
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ACD20_7_49
uncultured bacterium, Bacteria
|
Not on your lists |
45678..46307
|
phage SPO1 DNA polymerase-related protein
Phage SPO1 DNA polymerase-related protein n=2 Tax=Nostocaceae RepID=D4TMH8_9NOST (db=UNIREF evalue=1.0e-55 bit_score=219.0 identity=59.04 coverage=88.0952380952381)
seg (db=Seg db_id=seg from=128 to=139)
|
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ACD20_7_50
uncultured bacterium, Bacteria
|
Not on your lists |
46529..49459
|
seg (db=Seg db_id=seg from=897 to=919)
coiled-coil (db=Coil db_id=coil from=887 to=922 evalue=NA)
coiled-coil (db=Coil db_id=coil from=736 to=757 evalue=NA)
coiled-coil (db=Coil db_id=coil from=372 to=393 evalue=NA)
|
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ACD20_7_51
uncultured bacterium, Bacteria
|
Not on your lists |
49507..49932
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=28)
seg (db=Seg db_id=seg from=112 to=124)
seg (db=Seg db_id=seg from=25 to=35)
Uncharacterized protein {ECO:0000313|EMBL:EKE02571.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_7_52
uncultured bacterium, Bacteria
|
Not on your lists |
49932..51305
|
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=240 to=257)
transmembrane_regions (db=TMHMM db_id=tmhmm from=264 to=278)
transmembrane_regions (db=TMHMM db_id=tmhmm from=282 to=299)
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ACD20_7_53
uncultured bacterium, Bacteria
|
Not on your lists |
comp(51312..51680)
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51312..51680 - (rbs_motif=GGAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02573.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_7_54
uncultured bacterium, Bacteria
|
Not on your lists |
52036..52965
|
Redoxin domain protein n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UKB8_SINMW (db=UNIREF evalue=1.0e-70 bit_score=270.0 identity=44.34 coverage=96.4516129032258)
redoxin domain-containing protein
EF_HAND_1 (db=PatternScan db_id=PS00018 from=263 to=275 evalue=0.0 interpro_id=IPR018247 interpro_description=EF-Hand 1, calcium-binding site)
Thioredoxin-like (db=superfamily db_id=SSF52833 from=14 to=139 evalue=1.4e-29 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
|
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ACD20_7_55
uncultured bacterium, Bacteria
|
Not on your lists |
53115..54311
|
chorismate synthase (EC:4.2.3.5)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Bacillus tusciae DSM 2912 RepID=D5WQ16_9BACL (db=UNIREF evalue=8.0e-117 bit_score=424.0 identity=54.16 coverage=96.2406015037594)
CHORISMATE_SYNTHASE_3 (db=PatternScan db_id=PS00789 from=347 to=363 evalue=0.0 interpro_id=IPR020541 interpro_description=Chorismate synthase, conserved site GO=Molecular Function: chorismate synthase activity (GO:0004107), Biological Process: aromatic amino acid family biosynthetic process (GO:0009073))
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ACD20_7_56
uncultured bacterium, Bacteria
|
Not on your lists |
54325..54840
|
Shikimate kinase n=1 Tax=bacterium S5 RepID=D3C0F4_9BACT (db=UNIREF evalue=3.0e-39 bit_score=164.0 identity=45.12 coverage=94.7674418604651)
aroK; shikimate kinase (EC:2.7.1.71)
SHIKIMATE_KINASE (db=PatternScan db_id=PS01128 from=58 to=83 evalue=0.0 interpro_id=IPR000623 interpro_description=Shikimate kinase GO=Molecular Function: shikimate kinase activity (GO:0004765), Molecular Function: ATP binding (GO:0005524))
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=1 to=166 evalue=1.9e-49)
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ACD20_7_57
uncultured bacterium, Bacteria
|
Not on your lists |
54833..55954
|
aroB; 3-dehydroquinate synthase (EC:4.2.3.12)
3-dehydroquinate synthase n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IU93_9CHRO (db=UNIREF evalue=2.0e-86 bit_score=322.0 identity=45.16 coverage=96.7914438502674)
aroB: 3-dehydroquinate synthase (db=HMMTigr db_id=TIGR01357 from=17 to=369 evalue=2.6e-135 interpro_id=IPR016037 interpro_description=3-dehydroquinate synthase AroB, subgroup GO=Molecular Function: 3-dehydroquinate synthase activity (GO:0003856), Cellular Component: cytoplasm (GO:0005737), Biological Process: aromatic amino acid family biosynthetic process (GO:0009073))
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ACD20_7_58
GWF2_Melainabacteria_32_7_curated, Melainabacteria, Bacteria
|
Not on your lists |
56353..57546
|
seg (db=Seg db_id=seg from=286 to=355)
seg (db=Seg db_id=seg from=263 to=283)
seg (db=Seg db_id=seg from=228 to=257)
seg (db=Seg db_id=seg from=78 to=106)
|
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ACD20_7_59
uncultured bacterium, Bacteria
|
Not on your lists |
comp(57691..59628)
|
porin
seg (db=Seg db_id=seg from=496 to=516)
coiled-coil (db=Coil db_id=coil from=116 to=158 evalue=NA)
seg (db=Seg db_id=seg from=125 to=137)
|
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ACD20_7_60
uncultured bacterium, Bacteria
|
Not on your lists |
comp(59893..60018)
|
59893..60018 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE02563.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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