Alias: ACD20_71162.23698.13
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD20_27_1
uncultured bacterium, Bacteria
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Not on your lists |
comp(107..877)
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107..877 - (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02522.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_27_2
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria
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Not on your lists |
1034..1330
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1034..1330 + (rbs_motif=AGGA/GGAG/GAGG rbs_spacer=11-12bp)
hypothetical protein Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
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ACD20_27_3
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria
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Not on your lists |
1290..1970
|
hypothetical protein (db=KEGG evalue=1.0e-08 bit_score=63.2 identity=26.13 coverage=80.6167400881057)
Transposase_11 (db=HMMPfam db_id=PF01609 from=61 to=189 evalue=1.2e-18 interpro_id=IPR002559 interpro_description=Transposase, IS4-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=56 to=196 evalue=4.0e-18 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
hypothetical protein alias=ACD20_71162.23698.13G0003,ACD20_71162.23698.13_3,ACD20_C00027G00003 id=18494 tax=ACD20 species=unknown genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
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ACD20_27_4
uncultured bacterium, Bacteria
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Not on your lists |
comp(1974..2525)
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seg (db=Seg db_id=seg from=125 to=147)
Uncharacterized protein {ECO:0000313|EMBL:EKE02520.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_27_5
uncultured bacterium, Bacteria
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Not on your lists |
2720..2944
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2720..2944 + (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02521.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_27_6
uncultured bacterium, Bacteria
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Not on your lists |
comp(3028..3366)
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3028..3366 - (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02512.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_27_7
uncultured bacterium, Bacteria
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Not on your lists |
3998..5140
|
radical SAM protein
seg (db=Seg db_id=seg from=53 to=64)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=61 to=350 evalue=3.2e-33)
Radical_SAM (db=HMMPfam db_id=PF04055 from=68 to=221 evalue=1.1e-13 interpro_id=IPR007197 interpro_description=Radical SAM GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: iron-sulfur cluster binding (GO:0051536))
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ACD20_27_8
uncultured bacterium, Bacteria
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Not on your lists |
comp(5354..5713)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=75)
transmembrane_regions (db=TMHMM db_id=tmhmm from=16 to=38)
seg (db=Seg db_id=seg from=108 to=119)
seg (db=Seg db_id=seg from=12 to=26)
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ACD20_27_9
uncultured bacterium, Bacteria
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Not on your lists |
comp(5720..7777)
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NAD-dependent DNA ligase (EC:6.5.1.2)
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Ammonifex degensii KC4 RepID=C9RD93_AMMDK (db=UNIREF evalue=0.0 bit_score=663.0 identity=52.02 coverage=95.7725947521866)
seg (db=Seg db_id=seg from=635 to=648)
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ACD20_27_10
uncultured bacterium, Bacteria
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Not on your lists |
comp(7896..8678)
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TnpA n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STV0_ACILW (db=UNIREF evalue=9.0e-12 bit_score=73.9 identity=28.28 coverage=85.0574712643678)
transposase (db=KEGG evalue=1.0e-08 bit_score=63.5 identity=26.1 coverage=86.5900383141762)
seg (db=Seg db_id=seg from=7 to=18)
coiled-coil (db=Coil db_id=coil from=159 to=180 evalue=NA)
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ACD20_27_11
uncultured bacterium, Bacteria
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Not on your lists |
comp(8864..9175)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKE02517.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_27_12
uncultured bacterium, Bacteria
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Not on your lists |
9367..10740
|
Orn/Lys/Arg decarboxylase
Orn/Lys/Arg decarboxylase
coiled-coil (db=Coil db_id=coil from=362 to=383 evalue=NA)
coiled-coil (db=Coil db_id=coil from=274 to=302 evalue=NA)
|
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ACD20_27_13
uncultured bacterium, Bacteria
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Not on your lists |
10903..13068
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V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
V-type H(+)-translocating pyrophosphatase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATG4_PELPD (db=UNIREF evalue=2.0e-174 bit_score=617.0 identity=58.3 coverage=91.5512465373961)
transmembrane_regions (db=TMHMM db_id=tmhmm from=177 to=199)
|
membrane bound (10 psort) 14 internal helices
kelly wrighton
(11/15/12)
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ACD20_27_14
uncultured bacterium, Bacteria
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Not on your lists |
comp(13730..14971)
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Aluminium resistance family protein n=1 Tax='Nostoc azollae' 0708 RepID=B9YU78_ANAAZ (db=UNIREF evalue=6.0e-134 bit_score=481.0 identity=58.54 coverage=95.8937198067633)
aluminium resistance protein
aluminium resistance protein
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ACD20_27_15
uncultured bacterium, Bacteria
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Not on your lists |
15123..15821
|
hypothetical protein
Putative uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU46_9FIRM (db=UNIREF evalue=2.0e-33 bit_score=145.0 identity=41.94 coverage=87.5536480686695)
coiled-coil (db=Coil db_id=coil from=48 to=83 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
|
cytoplasmic
kelly wrighton
(11/15/12)
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ACD20_27_16
uncultured bacterium, Bacteria
|
Not on your lists |
15844..17070
|
FAD binding domain.
seg (db=Seg db_id=seg from=19 to=43)
seg (db=Seg db_id=seg from=56 to=69)
FAD/NAD(P)-binding domain (db=superfamily db_id=SSF51905 from=1 to=160 evalue=2.4e-22)
|
membrane bound
do not think is FR-mis annotation. best blast are not to FR at all (but to FAD dependent oxido reductase), missing other subunits. .
kelly wrighton
(11/15/12)
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ACD20_27_17
uncultured bacterium, Bacteria
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Not on your lists |
17210..18091
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=246 to=268)
transmembrane_regions (db=TMHMM db_id=tmhmm from=209 to=231)
transmembrane_regions (db=TMHMM db_id=tmhmm from=177 to=196)
transmembrane_regions (db=TMHMM db_id=tmhmm from=150 to=172)
|
8 helices found. membrane bound
kelly wrighton
(11/15/12)
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ACD20_27_18
uncultured bacterium, Bacteria
|
Not on your lists |
18312..18575
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=85)
Uncharacterized protein {ECO:0000313|EMBL:EKE02509.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_27_19
uncultured bacterium, Bacteria
|
Not on your lists |
18830..19126
|
chaperonin Cpn10
10 kDa chaperonin n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z8X0_9BACT (db=UNIREF evalue=5.0e-25 bit_score=116.0 identity=60.0 coverage=94.9494949494949)
seg (db=Seg db_id=seg from=18 to=24)
CHAPERONINS_CPN10 (db=PatternScan db_id=PS00681 from=6 to=30 evalue=0.0 interpro_id=IPR018369 interpro_description=Chaperonin Cpn10, conserved site GO=Molecular Function: ATP binding (GO:0005524), Biological Process: protein folding (GO:0006457))
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ACD20_27_20
uncultured bacterium, Bacteria
|
Not on your lists |
19154..20785
|
groEL; chaperonin GroEL
groEL; chaperonin GroEL
60 kDa chaperonin 2 n=1 Tax=Gloeobacter violaceus RepID=CH602_GLOVI (db=UNIREF evalue=0.0 bit_score=702.0 identity=68.18 coverage=96.875)
seg (db=Seg db_id=seg from=372 to=387)
|
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ACD20_27_21
uncultured bacterium, Bacteria
|
Not on your lists |
21277..21672
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=87 to=109)
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=83)
seg (db=Seg db_id=seg from=111 to=124)
Uncharacterized protein {ECO:0000313|EMBL:EKE02500.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
|
|
ACD20_27_22
uncultured bacterium, Bacteria
|
Not on your lists |
21923..22177
|
hypothetical protein
HicA protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3ISD2_9CHRO (db=UNIREF evalue=5.0e-17 bit_score=90.1 identity=54.29 coverage=81.1764705882353)
seg (db=Seg db_id=seg from=3 to=14)
HicA protein {ECO:0000313|EMBL:EKE02501.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_27_23
uncultured bacterium, Bacteria
|
Not on your lists |
22174..22584
|
HicB family protein n=2 Tax=Cyanothece RepID=B7JV52_CYAP8 (db=UNIREF evalue=2.0e-34 bit_score=147.0 identity=54.46 coverage=81.021897810219)
HicB family protein
HicB (db=HMMPfam db_id=PF05534 from=55 to=105 evalue=1.4e-15 interpro_id=IPR008651 interpro_description=HicB)
HicB family protein {ECO:0000313|EMBL:EKE02502.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_27_24
uncultured bacterium, Bacteria
|
Not on your lists |
22855..23157
|
CxxC-x17-CxxC domain containing protein
coiled-coil (db=Coil db_id=coil from=42 to=63 evalue=NA)
seg (db=Seg db_id=seg from=46 to=62)
Uncharacterized protein {ECO:0000313|EMBL:EKE02503.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD20_27_25
uncultured bacterium, Bacteria
|
Not on your lists |
23296..23562
|
23296..23562 + (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02504.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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