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ACD20_34

Alias: ACD20_1620.88547.14

Search features with annotation key words

Displaying items 31-60 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_34_31

Not on your lists

comp(33475..35046)
DNA (1572bp) protein (524aa)
Radical SAM domain protein n=1 Tax=Geobacter sp. FRC-32 RepID=B9M7H1_GEOSF (db=UNIREF evalue=3.0e-96 bit_score=356.0 identity=39.1 coverage=83.969465648855)
radical SAM protein
radical SAM protein
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=125 to=411 evalue=4.2e-50)
ACD20_34_32

Not on your lists

comp(35396..35983)
DNA (588bp) protein (196aa)
DNA integration/recombination/invertion protein
Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BWL2_9CLOT (db=UNIREF evalue=8.0e-41 bit_score=169.0 identity=47.89 coverage=94.3877551020408)
seg (db=Seg db_id=seg from=51 to=66)
DUF208 (db=HMMPfam db_id=PF02677 from=14 to=186 evalue=1.0e-63 interpro_id=IPR003828 interpro_description=Protein of unknown function DUF208)
ACD20_34_33

Not on your lists

comp(36126..37295)
DNA (1170bp) protein (390aa)
vitamin K epoxide reductase
transmembrane_regions (db=TMHMM db_id=tmhmm from=174 to=196)
seg (db=Seg db_id=seg from=136 to=148)
seg (db=Seg db_id=seg from=177 to=188)
ACD20_34_34

Not on your lists

37481..38242
DNA (762bp) protein (254aa)
seg (db=Seg db_id=seg from=204 to=225)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=44 to=61)
Pili subunits (db=superfamily db_id=SSF54523 from=9 to=125 evalue=2.9e-14)
ACD20_34_35

Not on your lists

comp(38239..39150)
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NDZ1_EUBSP (db=UNIREF evalue=1.0e-27 bit_score=127.0 identity=30.82 coverage=92.7631578947368)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=104 to=125 evalue=NA)
HAD-like (db=superfamily db_id=SSF56784 from=16 to=176 evalue=3.1e-11)
ACD20_34_36

Not on your lists

comp(39244..39732)
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K228_DESAC (db=UNIREF evalue=4.0e-08 bit_score=60.5 identity=29.63 coverage=63.1901840490798)
seg (db=Seg db_id=seg from=35 to=46)
UPF0153 (db=HMMPfam db_id=PF03692 from=38 to=117 evalue=8.8e-11 interpro_id=IPR005358 interpro_description=Uncharacterised protein family UPF0153)
Uncharacterized protein {ECO:0000313|EMBL:EKE04432.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_34_37

Not on your lists

comp(39940..41172)
DNA (1233bp) protein (411aa)
hypothetical protein
TPR repeat-containing protein n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2J9B9_NOSP7 (db=UNIREF evalue=5.0e-22 bit_score=109.0 identity=26.91 coverage=62.043795620438)
seg (db=Seg db_id=seg from=221 to=232)
TPR-like (db=superfamily db_id=SSF48452 from=4 to=277 evalue=1.6e-38)
ACD20_34_38

Not on your lists

comp(41211..41558)
DNA (348bp) protein (116aa)
seg (db=Seg db_id=seg from=72 to=86)
Uncharacterized protein {ECO:0000313|EMBL:EKE04434.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_34_39

Not on your lists

comp(42206..42478)
DNA (273bp) protein (91aa)
42206..42478 - (rbs_motif=GGAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE04435.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD20_34_40

Not on your lists

comp(42824..43462)
DNA (639bp) protein (213aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BVC3_9GAMM (db=UNIREF evalue=1.0e-15 bit_score=86.3 identity=46.36 coverage=50.7042253521127)
seg (db=Seg db_id=seg from=183 to=199)
seg (db=Seg db_id=seg from=144 to=178)
ACD20_34_41

Not on your lists

43763..44506
DNA (744bp) protein (248aa)
Co2+ ABC transporter permease-like protein
ABC-type Co2+ transport system permease component-like protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TNR0_ALKMQ (db=UNIREF evalue=2.0e-20 bit_score=102.0 identity=32.92 coverage=93.5483870967742)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=133 to=153)
membrane bound cytoplasmic kelly wrighton (11/15/12)
ACD20_34_42

Not on your lists

44508..45137
DNA (630bp) protein (210aa)
cobalt transport protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
seg (db=Seg db_id=seg from=125 to=136)
seg (db=Seg db_id=seg from=41 to=57)
ACD20_34_43

Not on your lists

45139..45987
DNA (849bp) protein (283aa)
ABC transporter-like protein
ABC transporter related n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TNR2_ALKMQ (db=UNIREF evalue=2.0e-65 bit_score=253.0 identity=48.69 coverage=93.6395759717314)
seg (db=Seg db_id=seg from=226 to=241)
seg (db=Seg db_id=seg from=212 to=222)
ACD20_34_44

Not on your lists

46305..46418
DNA (114bp) protein (38aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKE04416.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_34_45

Not on your lists

46679..47437
DNA (759bp) protein (253aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=114 to=136)
transmembrane_regions (db=TMHMM db_id=tmhmm from=156 to=178)
seg (db=Seg db_id=seg from=40 to=53)
ACD20_34_46

Not on your lists

48093..50954
DNA (2862bp) protein (954aa)
excinuclease ABC subunit A
excinuclease ABC subunit A
Excinuclease ABC, A subunit n=1 Tax=Thermincola sp. JR RepID=D5XCB4_9FIRM (db=UNIREF evalue=0.0 bit_score=1171.0 identity=62.66 coverage=97.9035639412998)
seg (db=Seg db_id=seg from=204 to=214)
ACD20_34_47

Not on your lists

51125..51748
DNA (624bp) protein (208aa)
Type IV pilus assembly PilZ n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LTN9_BACS4 (db=UNIREF evalue=5.0e-09 bit_score=64.3 identity=31.71 coverage=55.2884615384615)
type IV pilus assembly PilZ (db=KEGG evalue=2.0e-08 bit_score=62.0 identity=31.91 coverage=64.4230769230769)
PilZ (db=HMMPfam db_id=PF07238 from=92 to=194 evalue=2.6e-13 interpro_id=IPR009875 interpro_description=Type IV pilus assembly PilZ)
Type IV pilus assembly PilZ {ECO:0000313|EMBL:EKE04410.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_34_48

Not on your lists

51761..52063
DNA (303bp) protein (101aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=57)
seg (db=Seg db_id=seg from=81 to=97)
Uncharacterized protein {ECO:0000313|EMBL:EKE04411.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_34_49
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

Not on your lists

52104..52991
DNA (888bp) protein (296aa)
two component system sensor histidine kinase, hybrid (EC:2.7.13.3)
Sensor protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBA6_9PLAN (db=UNIREF evalue=1.0e-11 bit_score=73.9 identity=42.68 coverage=27.3648648648649)
seg (db=Seg db_id=seg from=174 to=183)
transmembrane_regions (db=TMHMM db_id=tmhmm from=174 to=196)
ACD20_34_50

Not on your lists

52975..53781
DNA (807bp) protein (269aa)
two-component sensor histidine kinase
SENSOR HISTIDINE KINASE-RELATED (db=HMMPanther db_id=PTHR23283 from=3 to=258 evalue=9.4e-74)
TWO COMPONENT HISTIDINE KINASE (SPORULATION KINASE) (db=HMMPanther db_id=PTHR23283:SF24 from=3 to=258 evalue=9.4e-74)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (db=superfamily db_id=SSF55874 from=107 to=263 evalue=3.9e-49 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
ACD20_34_51

Not on your lists

53788..54801
DNA (1014bp) protein (338aa)
response regulator receiver:metal-dependent phosphohydrolase
seg (db=Seg db_id=seg from=174 to=190)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=127 to=319 evalue=1.9e-41)
CheY-like (db=superfamily db_id=SSF52172 from=2 to=194 evalue=4.3e-31 interpro_id=IPR011006 interpro_description=CheY-like)
ACD20_34_52

Not on your lists

54913..55152
DNA (240bp) protein (80aa)
54913..55152 + (rbs_motif=AGGAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE04383.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_34_53

Not on your lists

55237..56367
DNA (1131bp) protein (377aa)
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
seg (db=Seg db_id=seg from=207 to=218)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=10 to=375 evalue=2.0e-116)
hemN_rel: putative oxygen-independent coprop (db=HMMTigr db_id=TIGR00539 from=9 to=366 evalue=1.1e-102 interpro_id=IPR004559 interpro_description=Putative oxygen-independent coproporphyrinogen III oxidase GO=Molecular Function: coproporphyrinogen oxidase activity (GO:0004109), Cellular Component: cytoplasm (GO:0005737), Biological Process: porphyrin biosynthetic process (GO:0006779), Biological Process: oxidation reduction (GO:0055114))
ACD20_34_54

Not on your lists

56389..57216
DNA (828bp) protein (276aa)
family 2 glycosyl transferase
seg (db=Seg db_id=seg from=171 to=182)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=33 to=239 evalue=1.3e-06)
Glycosyl transferase family 2 {ECO:0000313|EMBL:EKE04385.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_34_55

Not on your lists

comp(57412..57990)
DNA (579bp) protein (193aa)
engB; GTP-binding protein
GTPase_YsxC: ribosome biogenesis GTP-bind (db=HMMTigr db_id=TIGR03598 from=6 to=186 evalue=7.5e-96 interpro_id=IPR019987 interpro_description=GTP-binding protein, ribosome biogenesis, YsxC)
GTP-BINDING PROTEIN ENGB-RELATED (db=HMMPanther db_id=PTHR11649:SF13 from=18 to=192 evalue=2.6e-59)
MSS1/TRME-RELATED GTP-BINDING PROTEIN (db=HMMPanther db_id=PTHR11649 from=18 to=192 evalue=2.6e-59)
ACD20_34_56

Not on your lists

comp(57959..58234)
DNA (276bp) protein (92aa)
57959..58234 - (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE04387.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_34_57

Not on your lists

comp(58320..60755)
DNA (2436bp) protein (812aa)
hypothetical protein
hypothetical protein
Glr1294 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NL32_GLOVI (db=UNIREF evalue=5.0e-93 bit_score=346.0 identity=31.9 coverage=89.1625615763547)
seg (db=Seg db_id=seg from=5 to=24)
ACD20_34_58

Not on your lists

61081..61776
DNA (696bp) protein (232aa)
61081..61776 + (rbs_motif=AGGA rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE04389.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_34_59

Not on your lists

61959..63986
DNA (2028bp) protein (676aa)
Excinuclease ABC, B subunit n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PAZ9_CLOTS (db=UNIREF evalue=0.0 bit_score=838.0 identity=61.14 coverage=97.189349112426)
excinuclease ABC subunit B
excinuclease ABC subunit B
coiled-coil (db=Coil db_id=coil from=256 to=284 evalue=NA)
ACD20_34_60

Not on your lists

comp(64171..64743)
DNA (573bp) protein (191aa)
64171..64743 - (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE04391.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying items 31-60 of 77 in total

View Taxonomy