ggKbase home page

ACD20_37

Alias: ACD20_19028.4759.12

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_37_1

Not on your lists

comp(39..554)
DNA (516bp) protein (172aa)
fimbrial protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=128 to=139)
Pili subunits (db=superfamily db_id=SSF54523 from=9 to=126 evalue=5.3e-17)
ACD20_37_2

Not on your lists

comp(884..1027)
DNA (144bp) protein (48aa)
884..1027 - (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE04149.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_37_3

Not on your lists

1148..1561
DNA (414bp) protein (138aa)
hypothetical protein
Uncharacterised conserved protein, UCP004681 type (db=HMMPIR db_id=PIRSF004681 from=1 to=137 evalue=8.1e-52 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
YjbQ-like (db=superfamily db_id=SSF111038 from=1 to=137 evalue=1.9e-47 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
no description (db=Gene3D db_id=G3DSA:2.60.120.460 from=1 to=137 evalue=7.4e-44 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
ACD20_37_4

Not on your lists

1724..2059
DNA (336bp) protein (112aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=77)
seg (db=Seg db_id=seg from=47 to=72)
Uncharacterized protein {ECO:0000313|EMBL:EKE04151.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_37_5

Not on your lists

3341..3718
DNA (378bp) protein (126aa)
coiled-coil (db=Coil db_id=coil from=18 to=39 evalue=NA)
coiled-coil (db=Coil db_id=coil from=50 to=71 evalue=NA)
seg (db=Seg db_id=seg from=29 to=44)
Uncharacterized protein {ECO:0000313|EMBL:EKE04146.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_37_6

Not on your lists

comp(3798..4796)
DNA (999bp) protein (333aa)
seg (db=Seg db_id=seg from=38 to=53)
seg (db=Seg db_id=seg from=200 to=210)
seg (db=Seg db_id=seg from=261 to=292)
EF_HAND_1 (db=PatternScan db_id=PS00018 from=128 to=140 evalue=0.0 interpro_id=IPR018247 interpro_description=EF-Hand 1, calcium-binding site)
Displaying 6 items

View Taxonomy