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ACD20_47

Alias: ACD20_9246.70483.14

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Displaying items 61-67 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_47_61

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comp(64213..64647)
DNA (435bp) protein (145aa)
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.6)
Sugar-phosphate isomerase, RpiB/LacA/LacB types (db=HMMPIR db_id=PIRSF005384 from=1 to=144 evalue=5.2e-75 interpro_id=IPR003500 interpro_description=Ribose/galactose isomerase GO=Biological Process: carbohydrate metabolic process (GO:0005975))
rpiB_lacA_lacB: sugar-phosphate isomer (db=HMMTigr db_id=TIGR00689 from=6 to=144 evalue=1.1e-67 interpro_id=IPR003500 interpro_description=Ribose/galactose isomerase GO=Biological Process: carbohydrate metabolic process (GO:0005975))
rpiB: ribose 5-phosphate isomerase B (db=HMMTigr db_id=TIGR01120 from=5 to=144 evalue=4.6e-66 interpro_id=IPR004785 interpro_description=Ribose 5-phosphate isomerase B GO=Molecular Function: ribose-5-phosphate isomerase activity (GO:0004751), Biological Process: pentose-phosphate shunt (GO:0006098))
ACD20_47_62

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65409..65729
DNA (321bp) protein (107aa)
65409..65729 + (rbs_motif=AGGA rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02209.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_47_63

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comp(65802..66413)
DNA (612bp) protein (204aa)
Sua5/YciO/YrdC/YwlC family protein
Sua5_yciO_yrdC (db=HMMPfam db_id=PF01300 from=22 to=197 evalue=6.9e-47 interpro_id=IPR006070 interpro_description=Sua5/YciO/YrdC, N-terminal)
SUA5 (db=HMMPanther db_id=PTHR17490 from=22 to=201 evalue=5.3e-43)
YrdC/RibB (db=superfamily db_id=SSF55821 from=11 to=202 evalue=5.6e-43 interpro_id=IPR017945 interpro_description=DHBP synthase RibB-like alpha/beta domain)
ACD20_47_64

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66843..67217
DNA (375bp) protein (125aa)
rpsL; 30S ribosomal protein S12
RIBOSOMAL_S12 (db=PatternScan db_id=PS00055 from=43 to=50 evalue=0.0 interpro_id=IPR006032 interpro_description=Ribosomal protein S12/S23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpsL_bact: ribosomal protein S12 (db=HMMTigr db_id=TIGR00981 from=1 to=124 evalue=4.8e-93 interpro_id=IPR005679 interpro_description=Ribosomal protein S12, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
Ribosomal protein, S12p/S12a/S23e/organellar S12 types (db=HMMPIR db_id=PIRSF002133 from=1 to=124 evalue=3.4e-77 interpro_id=IPR006032 interpro_description=Ribosomal protein S12/S23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD20_47_65

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67230..67700
DNA (471bp) protein (157aa)
30S ribosomal protein S7
RIBOSOMAL_S7 (db=PatternScan db_id=PS00052 from=20 to=46 evalue=0.0 interpro_id=IPR020606 interpro_description=Ribosomal protein S7, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412))
rpsG_bact: ribosomal protein S7 (db=HMMTigr db_id=TIGR01029 from=3 to=156 evalue=1.1e-97 interpro_id=IPR005717 interpro_description=Ribosomal protein S7, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
Ribosomal_S7 (db=HMMPfam db_id=PF00177 from=1 to=149 evalue=7.1e-58 interpro_id=IPR000235 interpro_description=Ribosomal protein S7 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD20_47_66

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67964..70042
DNA (2079bp) protein (693aa)
Elongation factor G n=3 Tax=Nostocaceae RepID=A0ZFC0_NODSP (db=UNIREF evalue=0.0 bit_score=1010.0 identity=70.33 coverage=99.1341991341991)
translation elongation factor 2 (EF-2/EF-G)
translation elongation factor 2 (EF-2/EF-G)
EFACTOR_GTP (db=PatternScan db_id=PS00301 from=51 to=66 evalue=0.0 interpro_id=IPR000795 interpro_description=Protein synthesis factor, GTP-binding GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
ACD20_47_67

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comp(70112..70312)
DNA (201bp) protein (67aa)
70112..70312 - (rbs_motif=AGxAGG/AGGxGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02214.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying items 61-67 of 67 in total

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