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ACD20_47

Alias: ACD20_9246.70483.14

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Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_47_1

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41..553
DNA (513bp) protein (171aa)
pilin gene inverting protein
coiled-coil (db=Coil db_id=coil from=13 to=34 evalue=NA)
Transposase_20 (db=HMMPfam db_id=PF02371 from=35 to=120 evalue=4.9e-22 interpro_id=IPR003346 interpro_description=Transposase, IS116/IS110/IS902 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
pilin gene inverting protein alias=ACD20_9246.70483.14G0001,ACD20_9246.70483.14_1,ACD20_C00047G00001 id=19028 tax=ACD20 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
ACD20_47_2

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724..1974
DNA (1251bp) protein (417aa)
Histidyl-tRNA synthetase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTA0_9FIRM (db=UNIREF evalue=7.0e-115 bit_score=417.0 identity=48.92 coverage=97.1223021582734)
histidyl-tRNA synthetase (EC:6.1.1.21)
histidyl-tRNA synthetase (EC:6.1.1.21)
hisS: histidyl-tRNA synthetase (db=HMMTigr db_id=TIGR00442 from=4 to=403 evalue=7.6e-209 interpro_id=IPR015807 interpro_description=Histidyl-tRNA synthetase, class IIa, subgroup GO=Molecular Function: histidine-tRNA ligase activity (GO:0004821), Molecular Function: ATP binding (GO:0005524), Biological Process: translation (GO:0006412), Biological Process: histidyl-tRNA aminoacylation (GO:0006427))
ACD20_47_3

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comp(2189..2494)
DNA (306bp) protein (102aa)
seg (db=Seg db_id=seg from=31 to=45)
seg (db=Seg db_id=seg from=73 to=90)
Uncharacterized protein {ECO:0000313|EMBL:EKE02258.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_47_4

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comp(2733..4121)
DNA (1389bp) protein (463aa)
Biotin synthase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZG0_HALOH (db=UNIREF evalue=3.0e-155 bit_score=551.0 identity=56.16 coverage=98.0561555075594)
thiH; thiamine biosynthesis protein ThiH (EC:2.8.1.6)
thiH; thiamine biosynthesis protein ThiH (EC:2.8.1.6)
THIAMINE BIOSYNTHESIS PROTEIN THIH (db=HMMPanther db_id=PTHR22976:SF2 from=6 to=394 evalue=3.7e-164)
ACD20_47_5

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4525..5040
DNA (516bp) protein (172aa)
hydC; hydrogenase subunit HydC
NADH dehydrogenase [ubiquinone] (complex I), flavoprotein 2/NADH:quinone oxidoreductase (complex I), NuoE subunit (db=HMMPIR db_id=PIRSF000216 from=1 to=171 evalue=1.9e-52 interpro_id=IPR002023 interpro_description=NADH:ubiquinone oxidoreductase, 24kDa subunit GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
Complex1_24kDa (db=HMMPfam db_id=PF01257 from=23 to=166 evalue=2.0e-51 interpro_id=IPR002023 interpro_description=NADH:ubiquinone oxidoreductase, 24kDa subunit GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
NADH-UBIQUINONE OXIDOREDUCTASE 24 KDA SUBUNIT (db=HMMPanther db_id=PTHR10371 from=17 to=170 evalue=3.7e-51 interpro_id=IPR002023 interpro_description=NADH:ubiquinone oxidoreductase, 24kDa subunit GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
Fe hydrogenase subunit kelly wrighton (11/15/12)
ACD20_47_6

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5196..7094
DNA (1899bp) protein (633aa)
Fe-only hydrogenase, subunit beta
Fe-only hydrogenase, subunit beta
NADH dehydrogenase (Quinone) n=1 Tax=Thermincola sp. JR RepID=D5XCI2_9FIRM (db=UNIREF evalue=0.0 bit_score=717.0 identity=57.74 coverage=93.9968404423381)
seg (db=Seg db_id=seg from=170 to=178)
Fe hydrogenase subunit kelly wrighton (11/15/12)
ACD20_47_7

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comp(7169..8962)
DNA (1794bp) protein (598aa)
ferredoxin
ferredoxin
Hydrogenases, Fe-only n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J526_DESRM (db=UNIREF evalue=2.0e-165 bit_score=586.0 identity=57.65 coverage=95.1505016722408)
seg (db=Seg db_id=seg from=280 to=293)
catalytic subunit FeFe hydrogenase L1 L2 L3 motifs confirmed, 1 variant in L1 and 1 variant L3 kelly wrighton (11/15/12)
ACD20_47_8

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comp(8992..10149)
DNA (1158bp) protein (386aa)
Fe-only hydrogenase, fused subunits beta and gamma
Fe-only hydrogenase, fused subunits beta and gamma
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LEV2_TOLAT (db=UNIREF evalue=8.0e-104 bit_score=380.0 identity=49.87 coverage=98.1865284974093)
COMPLEX1_51K_2 (db=PatternScan db_id=PS00645 from=315 to=326 evalue=0.0 interpro_id=IPR001949 interpro_description=NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Molecular Function: FMN binding (GO:0010181), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
FeFe hydrogenase subunit beta (nadh-nad) kelly wrighton (11/15/12)
ACD20_47_9

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comp(10218..10694)
DNA (477bp) protein (159aa)
Fe-only hydrogenase, fused subunits beta and gamma
Complex1_24kDa (db=HMMPfam db_id=PF01257 from=11 to=154 evalue=1.8e-47 interpro_id=IPR002023 interpro_description=NADH:ubiquinone oxidoreductase, 24kDa subunit GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
NADH-UBIQUINONE OXIDOREDUCTASE 24 KDA SUBUNIT (db=HMMPanther db_id=PTHR10371 from=8 to=157 evalue=1.3e-43 interpro_id=IPR002023 interpro_description=NADH:ubiquinone oxidoreductase, 24kDa subunit GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
Thioredoxin-like (db=superfamily db_id=SSF52833 from=2 to=157 evalue=2.1e-43 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
fefe hydrogenase subunit gamma (Fd red >Fd) kelly wrighton (11/15/12)
ACD20_47_10

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11304..13052
DNA (1749bp) protein (583aa)
Putative hydrogenase, Fe-only subfamily n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R6H6_9THEO (db=UNIREF evalue=0.0 bit_score=702.0 identity=57.47 coverage=96.9125214408233)
hydrogenase, Fe-only
hydrogenase, Fe-only
COMPLEX1_75K_1 (db=PatternScan db_id=PS00641 from=41 to=58 evalue=0.0 interpro_id=IPR000283 interpro_description=NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Cellular Component: membrane (GO:0016020), Biological Process: ATP synthesis coupled electron transport (GO:0042773), Biological Process: oxidation reduction (GO:0055114))
Catlytic subunit- variant residues in M2 and M3 kelly wrighton (11/15/12)
ACD20_47_11

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13099..13488
DNA (390bp) protein (130aa)
response regulator
Response regulator SaeR n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NUG6_9BACL (db=UNIREF evalue=2.0e-08 bit_score=61.2 identity=32.28 coverage=90.7692307692308)
seg (db=Seg db_id=seg from=70 to=80)
CheY-like (db=superfamily db_id=SSF52172 from=2 to=127 evalue=1.1e-18 interpro_id=IPR011006 interpro_description=CheY-like)
ACD20_47_12

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comp(13610..14452)
DNA (843bp) protein (281aa)
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Cytochrome-c3 hydrogenase, gamma subunit (db=HMMPIR db_id=PIRSF006816 from=1 to=254 evalue=5.6e-64 interpro_id=IPR012165 interpro_description=Cytochrome-c3 hydrogenase, gamma subunit GO=Biological Process: pyrimidine nucleotide biosynthetic process (GO:0006221), Molecular Function: FAD binding (GO:0050660), Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537))
FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE (db=HMMPanther db_id=PTHR11938 from=1 to=164 evalue=3.3e-39)
DIHYDROOROTATE DEHYDROGENASE (db=HMMPanther db_id=PTHR11938:SF7 from=1 to=164 evalue=3.3e-39)
cytoplasmic kelly wrighton (11/15/12)
ACD20_47_13

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14850..15350
DNA (501bp) protein (167aa)
14850..15350 + (rbs_motif=AGGA rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02249.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_47_14

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comp(15386..16132)
DNA (747bp) protein (249aa)
DNA-binding response regulator n=3 Tax=Cyanobacteria RepID=Q2JIQ6_SYNJB (db=UNIREF evalue=8.0e-95 bit_score=350.0 identity=71.01 coverage=94.3775100401606)
winged helix family two component transcriptional regulator
winged helix family two component transcriptional regulator
CheY-like (db=superfamily db_id=SSF52172 from=12 to=208 evalue=3.0e-46 interpro_id=IPR011006 interpro_description=CheY-like)
ACD20_47_15

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comp(16762..18129)
DNA (1368bp) protein (456aa)
response regulator receiver modulated metal dependent phosphohydrolase
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=264 to=453 evalue=3.7e-31)
HD (db=HMMPfam db_id=PF01966 from=295 to=414 evalue=1.7e-12 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain)
GAF domain-like (db=superfamily db_id=SSF55781 from=85 to=248 evalue=4.9e-10)
ACD20_47_16

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18651..20303
DNA (1653bp) protein (551aa)
ATPase AAA (EC:3.6.4.6)
AAA family ATPase, CDC48 subfamily n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IEZ0_ACIB4 (db=UNIREF evalue=2.0e-51 bit_score=207.0 identity=46.92 coverage=46.0980036297641)
AAA (db=PatternScan db_id=PS00674 from=412 to=430 evalue=0.0 interpro_id=IPR003960 interpro_description=ATPase, AAA-type, conserved site GO=Molecular Function: ATP binding (GO:0005524))
AAA-FAMILY ATPASE (db=HMMPanther db_id=PTHR23077 from=268 to=542 evalue=2.6e-79)
ACD20_47_17

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20468..21466
DNA (999bp) protein (333aa)
Putative deoxyguanosinetriphosphate triphosphohydrolase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J7C1_DESRM (db=UNIREF evalue=2.0e-111 bit_score=405.0 identity=60.8 coverage=95.4954954954955)
deoxyguanosinetriphosphate triphosphohydrolase-like protein
deoxyguanosinetriphosphate triphosphohydrolase-like protein
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=31 to=331 evalue=9.3e-75)
ACD20_47_18

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21521..23452
DNA (1932bp) protein (644aa)
DNA primase n=1 Tax=Thermincola sp. JR RepID=D5XA12_9FIRM (db=UNIREF evalue=4.0e-100 bit_score=369.0 identity=43.48 coverage=66.7701863354037)
DNA primase
DNA primase
dnaG: DNA primase (db=HMMTigr db_id=TIGR01391 from=7 to=447 evalue=1.2e-130 interpro_id=IPR006295 interpro_description=DNA primase, DnaG GO=Molecular Function: DNA primase activity (GO:0003896), Biological Process: DNA replication, synthesis of RNA primer (GO:0006269))
ACD20_47_19

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23433..24527
DNA (1095bp) protein (365aa)
RNA polymerase sigma-70 subunit RpoD
RNA polymerase sigma-70 subunit RpoD
RNA polymerase sigma factor n=1 Tax=Ammonifex degensii KC4 RepID=C9R939_AMMDK (db=UNIREF evalue=1.0e-113 bit_score=413.0 identity=73.04 coverage=79.1780821917808)
seg (db=Seg db_id=seg from=230 to=242)
ACD20_47_20

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24641..25180
DNA (540bp) protein (180aa)
hypothetical protein
Transposase IS200-like (db=superfamily db_id=SSF143422 from=1 to=139 evalue=7.7e-25)
Transposase_17 (db=HMMPfam db_id=PF01797 from=10 to=132 evalue=1.0e-11 interpro_id=IPR002686 interpro_description=Transposase IS200-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
hypothetical protein; K07491 putative transposase alias=ACD20_9246.70483.14G0020,ACD20_9246.70483.14_20,ACD20_C00047G00020 id=19017 tax=ACD20 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
ACD20_47_21

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25353..25871
DNA (519bp) protein (173aa)
seg (db=Seg db_id=seg from=144 to=159)
Uncharacterized protein {ECO:0000313|EMBL:EKE02247.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_47_22

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26430..26894
DNA (465bp) protein (155aa)
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1Z2_9CLOT (db=UNIREF evalue=9.0e-42 bit_score=172.0 identity=54.32 coverage=98.7096774193548)
hypothetical protein
Predicted methyltransferase, bacterial type (db=HMMPIR db_id=PIRSF004505 from=1 to=154 evalue=7.6e-75 interpro_id=IPR003742 interpro_description=SPOUT methyltransferase, predicted GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: rRNA processing (GO:0006364), Molecular Function: methyltransferase activity (GO:0008168))
alpha/beta knot (db=superfamily db_id=SSF75217 from=1 to=153 evalue=7.1e-65)
ACD20_47_23

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comp(26948..28102)
DNA (1155bp) protein (385aa)
cell division protein FtsZ
cell division protein FtsZ
Cell division protein ftsZ n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WL20_9SYNE (db=UNIREF evalue=2.0e-99 bit_score=366.0 identity=61.92 coverage=92.4675324675325)
seg (db=Seg db_id=seg from=30 to=38)
ACD20_47_24

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comp(28136..28480)
DNA (345bp) protein (115aa)
hypothetical protein
seg (db=Seg db_id=seg from=7 to=17)
transmembrane_regions (db=TMHMM db_id=tmhmm from=85 to=107)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
ACD20_47_25

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comp(28483..29223)
DNA (741bp) protein (247aa)
hypothetical protein
seg (db=Seg db_id=seg from=28 to=45)
transmembrane_regions (db=TMHMM db_id=tmhmm from=26 to=45)
DUF881 (db=HMMPfam db_id=PF05949 from=102 to=236 evalue=7.8e-39 interpro_id=IPR010273 interpro_description=Protein of unknown function DUF881, bacterial)
ACD20_47_26

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29700..30281
DNA (582bp) protein (194aa)
ARM repeat (db=superfamily db_id=SSF48371 from=42 to=193 evalue=8.6e-15 interpro_id=IPR016024 interpro_description=Armadillo-type fold GO=Molecular Function: binding (GO:0005488))
no description (db=Gene3D db_id=G3DSA:1.25.10.10 from=46 to=193 evalue=9.4e-08 interpro_id=IPR011989 interpro_description=Armadillo-like helical GO=Molecular Function: binding (GO:0005488))
HEAT (db=HMMPfam db_id=PF02985 from=100 to=126 evalue=0.0067 interpro_id=IPR000357 interpro_description=HEAT)
Uncharacterized protein {ECO:0000313|EMBL:EKE02242.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_47_27

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comp(30342..31280)
DNA (939bp) protein (313aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L6W3_RUMHA (db=UNIREF evalue=3.0e-34 bit_score=149.0 identity=32.69 coverage=97.444089456869)
seg (db=Seg db_id=seg from=85 to=96)
Formyltransferase (db=superfamily db_id=SSF53328 from=1 to=218 evalue=7.9e-50 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
ACD20_47_28

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comp(31364..31747)
DNA (384bp) protein (128aa)
CrcB protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=100 to=122)
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
ACD20_47_29

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32000..32431
DNA (432bp) protein (144aa)
32000..32431 + (rbs_motif=AGGAG/GGAGG rbs_spacer=11-12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02245.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_47_30

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32594..33550
DNA (957bp) protein (319aa)
molybdopterin cofactor synthesis protein A
seg (db=Seg db_id=seg from=39 to=51)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=32 to=295 evalue=1.6e-31)
Radical_SAM (db=HMMPfam db_id=PF04055 from=37 to=193 evalue=9.8e-12 interpro_id=IPR007197 interpro_description=Radical SAM GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: iron-sulfur cluster binding (GO:0051536))
Displaying items 1-30 of 67 in total

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