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ACD20_53

Alias: ACD20_6299.103852.14

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Displaying items 61-86 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_53_61

Not on your lists

70067..71077
DNA (1011bp) protein (337aa)
70067..71077 + (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02628.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_53_62

Not on your lists

71153..72427
DNA (1275bp) protein (425aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=368 to=387)
transmembrane_regions (db=TMHMM db_id=tmhmm from=334 to=356)
transmembrane_regions (db=TMHMM db_id=tmhmm from=297 to=319)
ACD20_53_63

Not on your lists

comp(72436..73926)
DNA (1491bp) protein (497aa)
radical SAM domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=466 to=488)
coiled-coil (db=Coil db_id=coil from=133 to=154 evalue=NA)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=165 to=392 evalue=5.5e-42)
ACD20_53_64

Not on your lists

comp(74095..75513)
DNA (1419bp) protein (473aa)
radical SAM domain-containing protein
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=142 to=374 evalue=8.7e-35)
no description (db=HMMSmart db_id=SM00729 from=174 to=389 evalue=5.1e-27 interpro_id=IPR006638 interpro_description=Elongator protein 3/MiaB/NifB)
RADICAL SAM PROTEINS (db=HMMPanther db_id=PTHR11918 from=9 to=369 evalue=7.8e-26 interpro_id=IPR005839 interpro_description=Methylthiotransferase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: RNA modification (GO:0009451), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
ACD20_53_65

Not on your lists

comp(75530..76018)
DNA (489bp) protein (163aa)
Membrane protein n=1 Tax=Beggiatoa sp. PS RepID=A7BPL4_9GAMM (db=UNIREF evalue=5.0e-16 bit_score=86.7 identity=40.15 coverage=77.9141104294479)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=60 to=82)
ACD20_53_66

Not on your lists

comp(76026..76538)
DNA (513bp) protein (171aa)
Membrane protein n=1 Tax=Beggiatoa sp. PS RepID=A7BQA2_9GAMM (db=UNIREF evalue=6.0e-10 bit_score=66.6 identity=31.93 coverage=94.1520467836257)
seg (db=Seg db_id=seg from=36 to=49)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
ACD20_53_67

Not on your lists

76646..77443
DNA (798bp) protein (266aa)
Similar to dolichyl-phosphate beta-D-mannosyltransferase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PW01_9BACT (db=UNIREF evalue=8.0e-65 bit_score=250.0 identity=51.93 coverage=86.4661654135338)
putative glycosyl transferase
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=230 evalue=3.4e-34)
GLYCOSYLTRANSFERASE RELATED (db=HMMPanther db_id=PTHR10859 from=12 to=234 evalue=2.1e-21)
ACD20_53_68

Not on your lists

comp(77406..78167)
DNA (762bp) protein (254aa)
methyltransferase family protein
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=248 evalue=2.5e-36)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=37 to=174 evalue=1.2e-24)
METHYLTRANSFERASE (db=HMMPanther db_id=PTHR10108 from=42 to=177 evalue=9.1e-20)
ACD20_53_69

Not on your lists

78426..79544
DNA (1119bp) protein (373aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PW02_9BACT (db=UNIREF evalue=7.0e-152 bit_score=540.0 identity=67.74 coverage=99.1957104557641)
radical SAM domain-containing protein
radical SAM domain-containing protein
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=33 to=335 evalue=3.4e-33)
ACD20_53_70

Not on your lists

79575..80570
DNA (996bp) protein (332aa)
Dehydratase-like protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89J63_BRAJA (db=UNIREF evalue=8.0e-138 bit_score=493.0 identity=69.85 coverage=97.5903614457831)
dehydratase-like protein
dehydratase-like protein
UDP-GLUCOSE 4-EPIMERASE (db=HMMPanther db_id=PTHR10366:SF45 from=9 to=312 evalue=4.8e-125)
ACD20_53_71

Not on your lists

80756..81328
DNA (573bp) protein (191aa)
histidinol-phosphatase n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC5C49 (db=UNIREF evalue=9.0e-36 bit_score=152.0 identity=43.48 coverage=82.7225130890052)
D,D-heptose 1,7-bisphosphate phosphatase
Histidinol-ppas: histidinol-phosphate (db=HMMTigr db_id=TIGR01656 from=3 to=156 evalue=3.9e-41 interpro_id=IPR006543 interpro_description=Histidinol-phosphate phosphatase GO=Biological Process: histidine biosynthetic process (GO:0000105), Molecular Function: histidinol-phosphatase activity (GO:0004401))
IMIDAZOLEGLYCEROL-PHOSPHATE DEHYDRATASE HIS7 (db=HMMPanther db_id=PTHR23133 from=4 to=190 evalue=4.5e-40)
ACD20_53_72

Not on your lists

81325..82071
DNA (747bp) protein (249aa)
nucleotidyltransferase
MANNOSE-1-PHOSPHATE GUANYLTRANSFERASE (db=HMMPanther db_id=PTHR22572:SF15 from=10 to=234 evalue=6.1e-64)
SUGAR-1-PHOSPHATE GUANYL TRANSFERASE (db=HMMPanther db_id=PTHR22572 from=10 to=234 evalue=6.1e-64)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=2 to=244 evalue=8.6e-64)
ACD20_53_73

Not on your lists

82068..82706
DNA (639bp) protein (213aa)
phosphoheptose isomerase
SIS domain (db=superfamily db_id=SSF53697 from=5 to=192 evalue=3.1e-25)
no description (db=Gene3D db_id=G3DSA:3.40.50.10490 from=9 to=193 evalue=2.2e-23)
SIS (db=HMMPfam db_id=PF01380 from=51 to=174 evalue=1.5e-07 interpro_id=IPR001347 interpro_description=Sugar isomerase (SIS) GO=Molecular Function: sugar binding (GO:0005529), Biological Process: carbohydrate metabolic process (GO:0005975))
ACD20_53_74

Not on your lists

82719..83813
DNA (1095bp) protein (365aa)
Radical SAM n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30U68_SULDN (db=UNIREF evalue=2.0e-129 bit_score=465.0 identity=57.42 coverage=99.4520547945205)
radical SAM family protein
radical SAM family protein
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=34 to=344 evalue=8.9e-40)
ACD20_53_75

Not on your lists

83825..85366
DNA (1542bp) protein (514aa)
rfaE; ADP-heptose synthetase
rfaE; ADP-heptose synthetase
ADP-heptose synthetase n=5 Tax=Leptospira interrogans RepID=D4HSP1_LEPIN (db=UNIREF evalue=6.0e-117 bit_score=425.0 identity=46.06 coverage=97.8599221789883)
seg (db=Seg db_id=seg from=478 to=494)
ACD20_53_76

Not on your lists

85381..86184
DNA (804bp) protein (268aa)
transketolase, beta subunit
seg (db=Seg db_id=seg from=110 to=123)
seg (db=Seg db_id=seg from=160 to=175)
no description (db=Gene3D db_id=G3DSA:3.40.50.970 from=8 to=265 evalue=6.2e-73)
ACD20_53_77

Not on your lists

86266..87207
DNA (942bp) protein (314aa)
transketolase
seg (db=Seg db_id=seg from=95 to=113)
1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE (db=HMMPanther db_id=PTHR11624:SF20 from=29 to=307 evalue=3.2e-77)
DEHYDROGENASE RELATED (db=HMMPanther db_id=PTHR11624 from=29 to=307 evalue=3.2e-77)
ACD20_53_78

Not on your lists

87191..88279
DNA (1089bp) protein (363aa)
Heme biosynthesis protein n=1 Tax=Beggiatoa sp. PS RepID=A7BVQ0_9GAMM (db=UNIREF evalue=3.0e-37 bit_score=159.0 identity=35.66 coverage=65.2892561983471)
hypothetical protein
MOAA_NIFB_PQQE (db=PatternScan db_id=PS01305 from=39 to=50 evalue=0.0 interpro_id=IPR000385 interpro_description=MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: metal ion binding (GO:0046872), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=31 to=330 evalue=6.0e-44)
ACD20_53_79

Not on your lists

comp(88292..92770)
DNA (4479bp) protein (1493aa)
hypothetical protein
seg (db=Seg db_id=seg from=949 to=965)
seg (db=Seg db_id=seg from=10 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD20_53_80

Not on your lists

comp(93254..93742)
DNA (489bp) protein (163aa)
seg (db=Seg db_id=seg from=151 to=160)
transmembrane_regions (db=TMHMM db_id=tmhmm from=123 to=145)
transmembrane_regions (db=TMHMM db_id=tmhmm from=69 to=91)
Uncharacterized protein {ECO:0000313|EMBL:EKE02647.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_53_81

Not on your lists

comp(93732..94322)
DNA (591bp) protein (197aa)
seg (db=Seg db_id=seg from=115 to=128)
transmembrane_regions (db=TMHMM db_id=tmhmm from=156 to=178)
Uncharacterized protein {ECO:0000313|EMBL:EKE02648.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_53_82

Not on your lists

comp(94632..95804)
DNA (1173bp) protein (391aa)
phosphoglycerate kinase (EC:2.7.2.3)
seg (db=Seg db_id=seg from=7 to=16)
PGLYCERATE_KINASE (db=PatternScan db_id=PS00111 from=13 to=23 evalue=0.0 interpro_id=IPR015911 interpro_description=Phosphoglycerate kinase, conserved site GO=Molecular Function: phosphoglycerate kinase activity (GO:0004618), Biological Process: glycolysis (GO:0006096))
Phosphoglycerate kinase (db=superfamily db_id=SSF53748 from=1 to=390 evalue=1.5e-110 interpro_id=IPR001576 interpro_description=Phosphoglycerate kinase GO=Molecular Function: phosphoglycerate kinase activity (GO:0004618), Biological Process: glycolysis (GO:0006096))
ACD20_53_83

Not on your lists

96503..98290
DNA (1788bp) protein (596aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Geobacter sulfurreducens RepID=Q749S1_GEOSL (db=UNIREF evalue=2.0e-111 bit_score=407.0 identity=42.32 coverage=84.0604026845638)
seg (db=Seg db_id=seg from=172 to=188)
ACD20_53_84

Not on your lists

98293..98784
DNA (492bp) protein (164aa)
hypothetical protein
seg (db=Seg db_id=seg from=4 to=18)
Uncharacterized protein {ECO:0000313|EMBL:EKE02651.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein alias=ACD20_C00053G00084,ACD20_6299.103852.14G0084,ACD20_6299.103852.14_84 id=19181 tax=ACD20 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
ACD20_53_85

Not on your lists

98799..100118
DNA (1320bp) protein (440aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Geobacter sulfurreducens RepID=Q749R9_GEOSL (db=UNIREF evalue=1.0e-92 bit_score=343.0 identity=42.99 coverage=94.5454545454545)
seg (db=Seg db_id=seg from=419 to=426)
ACD20_53_86

Not on your lists

100128..103715
DNA (3588bp) protein (1196aa)
hypothetical protein
seg (db=Seg db_id=seg from=899 to=908)
seg (db=Seg db_id=seg from=677 to=689)
seg (db=Seg db_id=seg from=175 to=187)
Displaying items 61-86 of 86 in total

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