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ACD20_58

Alias: ACD20_27288.16530.10

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_58_1

Not on your lists

246..638
DNA (393bp) protein (131aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKE03684.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Possibly a phage contig Jill Banfield (11/15/12)
ACD20_58_2

Not on your lists

727..1269
DNA (543bp) protein (181aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=138 to=160)
Uncharacterized protein {ECO:0000313|EMBL:EKE03685.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_58_3

Not on your lists

1351..2004
DNA (654bp) protein (218aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=135 to=157)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=100 to=113)
Uncharacterized protein {ECO:0000313|EMBL:EKE03686.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_58_4

Not on your lists

2042..2326
DNA (285bp) protein (95aa)
plasmid maintenance system killer protein
Plasmid_killer (db=HMMPfam db_id=PF05015 from=1 to=93 evalue=4.4e-26 interpro_id=IPR007711 interpro_description=Plasmid maintenance system killer)
RelE-like (db=superfamily db_id=SSF143011 from=1 to=93 evalue=1.7e-19)
Uncharacterized protein {ECO:0000313|EMBL:EKE03687.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_58_5

Not on your lists

2337..2633
DNA (297bp) protein (99aa)
hypothetical protein
antidote_HigA: addiction module antidot (db=HMMTigr db_id=TIGR02607 from=3 to=84 evalue=6.7e-30 interpro_id=IPR013430 interpro_description=Addiction module antidote protein, HigA GO=Molecular Function: DNA binding (GO:0003677))
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=4 to=71 evalue=2.5e-13 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
HTH_3 (db=HMMPfam db_id=PF01381 from=20 to=68 evalue=4.2e-09 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
ACD20_58_6

Not on your lists

2758..3207
DNA (450bp) protein (150aa)
hemerythrin-like metal-binding protein
HEMERYTHRINS (db=PatternScan db_id=PS00550 from=61 to=84 evalue=0.0 interpro_id=IPR016131 interpro_description=Haemerythrin, iron-binding site GO=Molecular Function: metal ion binding (GO:0046872))
hemeryth_dom: hemerythrin-like metal-bin (db=HMMTigr db_id=TIGR02481 from=8 to=142 evalue=1.0e-26 interpro_id=IPR012827 interpro_description=Haemerythrin-like, metal-binding GO=Molecular Function: metal ion binding (GO:0046872))
Hemerythrin (db=superfamily db_id=SSF47188 from=5 to=142 evalue=4.4e-26 interpro_id=IPR012827 interpro_description=Haemerythrin-like, metal-binding GO=Molecular Function: metal ion binding (GO:0046872))
ACD20_58_7

Not on your lists

comp(3223..3375)
DNA (153bp) protein (51aa)
seg (db=Seg db_id=seg from=2 to=23)
coiled-coil (db=Coil db_id=coil from=1 to=43 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE03690.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_58_8

Not on your lists

comp(3692..4282)
DNA (591bp) protein (197aa)
GDSL-like Lipase/Acylhydrolase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TU28_9PROT (db=UNIREF evalue=5.0e-10 bit_score=67.4 identity=25.0 coverage=87.3096446700508)
lipolytic enzyme, G-D-S-L (db=KEGG evalue=4.0e-09 bit_score=64.3 identity=29.12 coverage=88.3248730964467)
SGNH hydrolase (db=superfamily db_id=SSF52266 from=1 to=186 evalue=3.9e-28 interpro_id=IPR013830 interpro_description=Esterase, SGNH hydrolase-type)
no description (db=Gene3D db_id=G3DSA:3.40.50.1110 from=6 to=187 evalue=2.6e-17 interpro_id=IPR013831 interpro_description=Esterase, SGNH hydrolase-type, subgroup GO=Molecular Function: hydrolase activity (GO:0016787))
ACD20_58_9

Not on your lists

comp(4275..4769)
DNA (495bp) protein (165aa)
4275..4769 - (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE03672.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_58_10

Not on your lists

comp(5027..5482)
DNA (456bp) protein (152aa)
5027..5482 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE03673.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_58_11

Not on your lists

comp(5485..6066)
DNA (582bp) protein (194aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F1T8_9HELI (db=UNIREF evalue=5.0e-12 bit_score=73.9 identity=32.86 coverage=68.5567010309278)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
Uncharacterized protein {ECO:0000313|EMBL:EKE03674.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_58_12

Not on your lists

comp(6597..6866)
DNA (270bp) protein (90aa)
seg (db=Seg db_id=seg from=43 to=55)
Uncharacterized protein {ECO:0000313|EMBL:EKE03675.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_58_13

Not on your lists

comp(7027..7488)
DNA (462bp) protein (154aa)
hypothetical protein
Peptidase M15 family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VWY4_9CYAN (db=UNIREF evalue=3.0e-14 bit_score=80.5 identity=36.29 coverage=77.9220779220779)
Hedgehog/DD-peptidase (db=superfamily db_id=SSF55166 from=28 to=136 evalue=1.4e-18 interpro_id=IPR009045 interpro_description=Hedgehog/DD-peptidase, zinc-binding motif)
Peptidase_M15_3 (db=HMMPfam db_id=PF08291 from=29 to=135 evalue=2.5e-17 interpro_id=IPR013230 interpro_description=Peptidase M15A, C-terminal)
ACD20_58_14

Not on your lists

comp(7485..7772)
DNA (288bp) protein (96aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKE03677.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_58_15

Not on your lists

comp(8051..8629)
DNA (579bp) protein (193aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE03678.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative tail fiber assembly-like protein alias=ACD20_C00058G00015,ACD20_27288.16530.10G0015,ACD20_27288.16530.10_15 id=19313 tax=ACD20 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
ACD20_58_16

Not on your lists

8676..9323
DNA (648bp) protein (216aa)
type 11 methyltransferase
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=10 to=191 evalue=1.7e-29)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=27 to=177 evalue=1.1e-18)
Methyltransf_11 (db=HMMPfam db_id=PF08241 from=30 to=121 evalue=1.1e-14 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
ACD20_58_17

Not on your lists

comp(9320..9994)
DNA (675bp) protein (225aa)
Tail Collar domain-containing protein
Putative phage tail protein n=1 Tax=Enterobacteria phage Eco1230-10 RepID=D5LGZ0_9CAUD (db=UNIREF evalue=6.0e-29 bit_score=130.0 identity=42.94 coverage=71.5555555555555)
Receptor-binding domain of short tail fibre protein gp12 (db=superfamily db_id=SSF88874 from=77 to=224 evalue=5.3e-34)
Collar (db=HMMPfam db_id=PF07484 from=91 to=148 evalue=2.8e-21 interpro_id=IPR011083 interpro_description=Phage tail collar)
possibly phage contig Jill Banfield (11/15/12)
ACD20_58_18

Not on your lists

comp(10098..10784)
DNA (687bp) protein (229aa)
seg (db=Seg db_id=seg from=154 to=168)
seg (db=Seg db_id=seg from=205 to=218)
Uncharacterized protein {ECO:0000313|EMBL:EKE03681.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_58_19

Not on your lists

comp(10771..11313)
DNA (543bp) protein (181aa)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=29 to=172 evalue=1.5e-19 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=40 to=179 evalue=6.1e-15 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
GNAT (db=ProfileScan db_id=PS51186 from=19 to=173 evalue=11.327 interpro_id=IPR000182 interpro_description=GCN5-related N-acetyltransferase GO=Molecular Function: N-acetyltransferase activity (GO:0008080), Biological Process: metabolic process (GO:0008152))
Uncharacterized protein {ECO:0000313|EMBL:EKE03682.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_58_20

Not on your lists

comp(11310..11552)
DNA (243bp) protein (81aa)
11310..11552 - (rbs_motif=GGA/GAG/AGG rbs_spacer=3-4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE03683.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_58_21

Not on your lists

comp(13047..13766)
DNA (720bp) protein (240aa)
13047..13766 - (rbs_motif=AGGAG/GGAGG rbs_spacer=11-12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE03666.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_58_22

Not on your lists

comp(13852..14184)
DNA (333bp) protein (111aa)
coiled-coil (db=Coil db_id=coil from=22 to=47 evalue=NA)
seg (db=Seg db_id=seg from=22 to=33)
Uncharacterized protein {ECO:0000313|EMBL:EKE03667.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_58_23

Not on your lists

comp(14439..15050)
DNA (612bp) protein (204aa)
14439..15050 - (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE03668.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_58_24

Not on your lists

15166..15597
DNA (432bp) protein (144aa)
Hemerythrin (db=superfamily db_id=SSF47188 from=7 to=132 evalue=7.7e-14 interpro_id=IPR012827 interpro_description=Haemerythrin-like, metal-binding GO=Molecular Function: metal ion binding (GO:0046872))
hemeryth_dom: hemerythrin-like metal-bin (db=HMMTigr db_id=TIGR02481 from=8 to=132 evalue=5.4e-10 interpro_id=IPR012827 interpro_description=Haemerythrin-like, metal-binding GO=Molecular Function: metal ion binding (GO:0046872))
no description (db=Gene3D db_id=G3DSA:1.20.120.50 from=9 to=132 evalue=4.9e-09 interpro_id=IPR012827 interpro_description=Haemerythrin-like, metal-binding GO=Molecular Function: metal ion binding (GO:0046872))
Uncharacterized protein {ECO:0000313|EMBL:EKE03669.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_58_25

Not on your lists

comp(15670..16509)
DNA (840bp) protein (280aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE03670.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein alias=ACD20_C00058G00025,ACD20_27288.16530.10G0025,ACD20_27288.16530.10_25 id=19328 tax=ACD20 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Displaying 25 items

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