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ACD20_59

Alias: ACD20_3620.49982.14

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Displaying items 31-49 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_59_31

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28662..29714
DNA (1053bp) protein (351aa)
ftsY; signal recognition particle-docking protein FtsY
seg (db=Seg db_id=seg from=80 to=93)
SRP54 (db=PatternScan db_id=PS00300 from=322 to=335 evalue=0.0 interpro_id=IPR000897 interpro_description=Signal recognition particle, SRP54 subunit, GTPase GO=Molecular Function: GTP binding (GO:0005525), Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614))
ftsY: signal recognition particle-docking pr (db=HMMTigr db_id=TIGR00064 from=80 to=348 evalue=2.9e-129 interpro_id=IPR004390 interpro_description=Cell division transporter substrate-binding protein FtsY GO=Molecular Function: GTP binding (GO:0005525))
ACD20_59_32

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29754..31130
DNA (1377bp) protein (459aa)
ffh; signal recognition particle
ffh; signal recognition particle
Signal recognition particle subunit FFH/SRP54 (Srp54) n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJV8_MOOTA (db=UNIREF evalue=1.0e-133 bit_score=479.0 identity=56.16 coverage=91.2854030501089)
seg (db=Seg db_id=seg from=422 to=437)
ACD20_59_33

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31132..31632
DNA (501bp) protein (167aa)
methylated-DNA--[]-cysteine S-methyltransferase family protein (EC:2.1.1.63)
MGMT (db=PatternScan db_id=PS00374 from=132 to=138 evalue=0.0 interpro_id=IPR001497 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO=Molecular Function: methylated-DNA-[protein]-cysteine S-methyltransferase activity (GO:0003908), Biological Process: DNA repair (GO:0006281))
ogt: methylated-DNA-[protein]-cysteine S-met (db=HMMTigr db_id=TIGR00589 from=82 to=161 evalue=1.0e-47 interpro_id=IPR014048 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE (db=HMMPanther db_id=PTHR10815 from=45 to=161 evalue=1.0e-37 interpro_id=IPR014048 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
ACD20_59_34

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31887..32678
DNA (792bp) protein (264aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=107 to=128 evalue=NA)
YbjQ-like (db=superfamily db_id=SSF117782 from=128 to=235 evalue=3.7e-14)
DUF74 (db=HMMPfam db_id=PF01906 from=130 to=232 evalue=1.9e-12 interpro_id=IPR002765 interpro_description=Uncharacterised protein family UPF0145)
ACD20_59_35

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32662..32979
DNA (318bp) protein (106aa)
hypothetical protein
RmlC-like cupins (db=superfamily db_id=SSF51182 from=7 to=105 evalue=7.2e-21 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
Cupin_2 (db=HMMPfam db_id=PF07883 from=38 to=96 evalue=7.3e-11 interpro_id=IPR013096 interpro_description=Cupin 2, conserved barrel)
no description (db=Gene3D db_id=G3DSA:2.60.120.10 from=23 to=105 evalue=9.1e-06 interpro_id=IPR014710 interpro_description=RmlC-like jelly roll fold)
ACD20_59_36

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33444..34145
DNA (702bp) protein (234aa)
putative extracellular nuclease
Hemolysin-type calcium-binding region n=1 Tax=Arthrospira maxima CS-328 RepID=B5W3A2_SPIMA (db=UNIREF evalue=8.0e-21 bit_score=103.0 identity=44.62 coverage=47.4358974358974)
seg (db=Seg db_id=seg from=167 to=189)
seg (db=Seg db_id=seg from=192 to=203)
ACD20_59_37

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comp(34242..36614)
DNA (2373bp) protein (791aa)
MutS2 family protein
MutS2 family protein
MutS2 family protein n=1 Tax=Thermincola sp. JR RepID=D5X7Z4_9FIRM (db=UNIREF evalue=9.0e-163 bit_score=578.0 identity=41.53 coverage=98.4829329962073)
coiled-coil (db=Coil db_id=coil from=573 to=601 evalue=NA)
ACD20_59_38

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36795..37379
DNA (585bp) protein (195aa)
CAAX amino terminal protease
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PWJ9_9BACT (db=UNIREF evalue=2.0e-13 bit_score=78.6 identity=32.07 coverage=92.3076923076923)
seg (db=Seg db_id=seg from=95 to=102)
transmembrane_regions (db=TMHMM db_id=tmhmm from=162 to=184)
ACD20_59_39

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37541..38239
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VZG0_9CYAN (db=UNIREF evalue=4.0e-66 bit_score=254.0 identity=49.57 coverage=99.1416309012876)
Pirin domain-containing protein
RmlC-like cupins (db=superfamily db_id=SSF51182 from=1 to=232 evalue=1.6e-69 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
Pirin (db=HMMPIR db_id=PIRSF006232 from=1 to=229 evalue=2.4e-45 interpro_id=IPR012093 interpro_description=Pirin)
ACD20_59_40

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comp(38248..38991)
DNA (744bp) protein (248aa)
hypothetical protein
MgtC/SapB transporter n=3 Tax=Burkholderia RepID=B1FV98_9BURK (db=UNIREF evalue=1.0e-21 bit_score=107.0 identity=49.33 coverage=59.2741935483871)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=37)
seg (db=Seg db_id=seg from=112 to=122)
ACD20_59_41

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comp(39018..40106)
DNA (1089bp) protein (363aa)
oligopeptide transport system permease protein AppC
oligopeptide transport system permease protein AppC
Oligopeptide transport system permease protein AppC n=1 Tax=Persephonella marina EX-H1 RepID=C0QQ78_PERMH (db=UNIREF evalue=4.0e-96 bit_score=355.0 identity=51.74 coverage=93.66391184573)
transmembrane_regions (db=TMHMM db_id=tmhmm from=221 to=240)
ACD20_59_42

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comp(40110..41078)
DNA (969bp) protein (323aa)
OppBC ABC transporter family permease
OppBC ABC transporter family permease
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q119D1_TRIEI (db=UNIREF evalue=1.0e-88 bit_score=330.0 identity=54.37 coverage=97.8328173374613)
transmembrane_regions (db=TMHMM db_id=tmhmm from=185 to=204)
ACD20_59_43

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comp(41081..42940)
DNA (1860bp) protein (620aa)
extracellular solute-binding protein family 5
extracellular solute-binding protein family 5
Extracellular solute-binding protein family 5 n=2 Tax=Cyanothece RepID=B7K3D7_CYAP8 (db=UNIREF evalue=2.0e-108 bit_score=397.0 identity=40.73 coverage=86.1290322580645)
seg (db=Seg db_id=seg from=6 to=20)
ACD20_59_44

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comp(43152..44147)
DNA (996bp) protein (332aa)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=160 to=325 evalue=1.1e-16 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=196 to=326 evalue=1.8e-08 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acetyltransf_1 (db=HMMPfam db_id=PF00583 from=234 to=314 evalue=4.0e-06 interpro_id=IPR022610 interpro_description=GCN5-related N-acetyltransferase, C-terminal)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=7 to=88 evalue=0.0018 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
ACD20_59_45

Not on your lists

comp(44268..45539)
DNA (1272bp) protein (424aa)
S-adenosylmethionine synthase n=1 Tax=Cyanothece sp. PCC 7425 RepID=METK_CYAP4 (db=UNIREF evalue=2.0e-161 bit_score=572.0 identity=66.1 coverage=96.2264150943396)
methionine adenosyltransferase (EC:2.5.1.6)
methionine adenosyltransferase (EC:2.5.1.6)
ADOMET_SYNTHASE_1 (db=PatternScan db_id=PS00376 from=129 to=139 evalue=0.0 interpro_id=IPR022631 interpro_description=S-adenosylmethionine synthetase, conserved site)
ACD20_59_46

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comp(45891..46238)
DNA (348bp) protein (116aa)
45891..46238 - (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE03224.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_59_47

Not on your lists

46395..47114
DNA (720bp) protein (240aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=195 to=217)
TRAP-like (db=superfamily db_id=SSF51219 from=4 to=238 evalue=1.2e-61 interpro_id=IPR016031 interpro_description=Tryptophan RNA-binding attenuator protein-like)
DUF124 (db=HMMPfam db_id=PF01987 from=7 to=217 evalue=9.6e-57 interpro_id=IPR002838 interpro_description=Protein of unknown function DUF124)
ACD20_59_48

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47308..49143
DNA (1836bp) protein (612aa)
N-acetylmuramoyl-L-alanine amidase
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=167 to=175)
seg (db=Seg db_id=seg from=206 to=220)
ACD20_59_49

Not on your lists

49179..49982
DNA (804bp) protein (268aa)
glutamate racemase (EC:5.1.1.3)
ASP_GLU_RACEMASE_2 (db=PatternScan db_id=PS00924 from=180 to=190 evalue=0.0 interpro_id=IPR018187 interpro_description=Asp/Glu racemase, active site GO=Molecular Function: racemase and epimerase activity, acting on amino acids and derivatives (GO:0016855))
GLUTAMATE RACEMASE (db=HMMPanther db_id=PTHR21198 from=1 to=239 evalue=3.8e-76)
glut_race: glutamate racemase (db=HMMTigr db_id=TIGR00067 from=5 to=254 evalue=9.2e-72 interpro_id=IPR004391 interpro_description=Glutamate racemase GO=Molecular Function: glutamate racemase activity (GO:0008881), Biological Process: peptidoglycan biosynthetic process (GO:0009252))
Displaying items 31-49 of 49 in total

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